RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 GOLGA8FQ08AF8 430 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 GOLGA8DPQ0D2H9 430 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 LCA5Q86VQ0 697 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 USP28Q96RU2 1077 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 PCDHA12Q9UN75 941 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 SYNMO15061 1565 aa9.93□□□□□ -0.82
CSMD1-218ENST00000635120 NEURL1BA8MQ27 555 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TRIM37O94972 964 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 PKP1Q13835 747 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 KIF22Q14807 665 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 XKR9Q5GH70 373 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 BZW2Q9Y6E2 419 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 CARMIL3Q8ND23 1372 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 H0YCG3 227 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 SEC31AO94979 1220 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 EXOC3L4Q17RC7 722 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 LRRC47Q8N1G4 583 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 BBOF1Q8ND07 529 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 NUP153P49790 1475 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 LRRIQ4A6NIV6 560 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 ETF1P62495 437 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 NIM1KQ8IY84 436 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TRIML1Q8N9V2 468 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TBC1D22AQ8WUA7 517 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 MIS12Q9H081 205 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 GCNT4Q9P109 453 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 RRP15Q9Y3B9 282 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 ZNF500O60304 480 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 CMA1P23946 247 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 SUGCTQ9HAC7 445 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TXLNGQ9NUQ3 528 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TPCN1Q9ULQ1 816 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 POLGP54098 1239 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 PTH1RQ03431 593 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 PTGDRQ13258 359 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 RAPH1Q70E73 1250 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 PIP4K2CQ8TBX8 421 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 CHMP6Q96FZ7 201 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 INTS9Q9NV88 658 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 FAM135BQ49AJ0 1406 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 UHRF1BP1Q6BDS2 1440 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 ENC1O14682 589 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 SCG2P13521 617 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 SLC12A1Q13621 1099 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 PDCD2Q16342 344 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TCP11Q8WWU5 503 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 SLC4A1P02730 911 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 ADAM9Q13443 819 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 ATP8A2Q9NTI2 1148 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 LPXNO60711 386 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TMED2Q15363 201 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 CYP4F22Q6NT55 531 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 PDE1BQ01064 536 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 MESDQ14696 234 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 GDAP1Q8TB36 358 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 CDKL2Q92772 493 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 TM6SF1Q9BZW5 370 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 PDE6AP16499 860 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 RSBN1LQ6PCB5 846 aaPredicted RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 MRFAP1L1Q96HT8 127 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 CNOT6LQ96LI5 555 aaKnown RBP9.92□□□□□ -0.82
CSMD1-218ENST00000635120 USP40Q9NVE5 1235 aa9.92□□□□□ -0.82
CSMD1-218ENST00000635120 MYOM2P54296 1465 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 GOLGA8QA0A0J9YX86 632 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 GOLGA8OA6NCC3 632 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 GOLGA8NF8WBI6 632 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 RUNDC3BQ96NL0 473 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 PFKFB2O60825 505 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 CPP00450 1065 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 RPSAP08865 295 aaKnown RBP9.91□□□□□ -0.82
CSMD1-218ENST00000635120 ASPHQ12797 758 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 SDR42E1Q8WUS8 393 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 ZNF274Q96GC6 653 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-218ENST00000635120 LGR6Q9HBX8 967 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 H0YIN7 160 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 ZBTB24O43167 697 aaPredicted RBP9.91□□□□□ -0.82
CSMD1-218ENST00000635120 TOM1O60784 492 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 H2AFZP0C0S5 128 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 PRPSAP1Q14558 356 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 H2AFVQ71UI9 128 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 ATP8A1Q9Y2Q0 1164 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 GSTA4O15217 222 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 RBM6P78332 1123 aaKnown RBP9.91□□□□□ -0.82
CSMD1-218ENST00000635120 E2F5Q15329 346 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 SPATA1Q5VX52 437 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 PSPC1Q8WXF1 523 aaKnown RBP9.91□□□□□ -0.82
CSMD1-218ENST00000635120 HESX1Q9UBX0 185 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 MTMR6Q9Y217 621 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 CLIC4Q9Y696 253 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 NCKAP5LQ9HCH0 1330 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 TMEM191BP0C7N4 346 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 POLR2MP0CAP2 368 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 CASP14P31944 242 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 NEK8Q86SG6 692 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 RFX6Q8HWS3 928 aa9.91□□□□□ -0.82
CSMD1-218ENST00000635120 MAML1Q92585 1016 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms