RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TNFAIP2Q03169 654 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 BFSP1Q12934 665 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 EXD1Q8NHP7 514 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 BBOX1O75936 387 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 SLC4A1P02730 911 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 SEMA3FQ13275 785 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 FAM149B1Q96BN6 582 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 MAGEB5Q9BZ81 275 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 PRRG1O14668 218 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 LRG1P02750 347 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 FCER1AP12319 257 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 BRAFP15056 766 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 PIK3CAP42336 1068 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 KSR2Q6VAB6 950 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 APPL2Q8NEU8 664 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 WHAMMQ8TF30 809 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 IQCDQ96DY2 449 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 EIF2AQ9BY44 585 aaKnown RBP6.84□□□□□ -1.31
CDKL5-205ENST00000623535 ZNF341Q9BYN7 854 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 SEMA3EO15041 775 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 CREB3O43889 395 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 SLMAPQ14BN4 828 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 TICAM2Q86XR7 235 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 XDHP47989 1333 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 LSP1P33241 339 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 TBC1D25Q3MII6 688 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 KIAA0825Q8IV33 1275 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 TPH2Q8IWU9 490 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 CTAGE3PQ8IX95 158 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 ENTPD7Q9NQZ7 604 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 RTL1A6NKG5 1358 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 PRIM1P49642 420 aaKnown RBP6.84□□□□□ -1.31
CDKL5-205ENST00000623535 KRBA2Q6ZNG9 492 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 MAEAQ7L5Y9 396 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 WDR62O43379 1518 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 SART1O43290 800 aaKnown RBP6.84□□□□□ -1.31
CDKL5-205ENST00000623535 PEX6Q13608 980 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 NME9Q86XW9 330 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 GRK7Q8WTQ7 553 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 AFG1LQ8WV93 481 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 DCUN1D1Q96GG9 259 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 SELENOSQ9BQE4 189 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 MPOP05164 745 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 FAM186BQ8IYM0 893 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 ARFGAP2Q8N6H7 521 aa6.84□□□□□ -1.31
CDKL5-205ENST00000623535 USP17L3A6NCW0 530 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 USP17L4A6NCW7 530 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 HOXA2O43364 376 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 POMCP01189 267 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 SKIP12755 728 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 IGFBP4P22692 258 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 THOC5Q13769 683 aaKnown RBP6.84□□□□□ -1.32
CDKL5-205ENST00000623535 NBPF10Q6P3W6 841 aaKnown RBP6.84□□□□□ -1.32
CDKL5-205ENST00000623535 ANGPTL8Q6UXH0 198 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 CHMP1BQ7LBR1 199 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 USP17L1Q7RTZ2 530 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 MCCC1Q96RQ3 725 aaPredicted RBP6.84□□□□□ -1.32
CDKL5-205ENST00000623535 KDM4CQ9H3R0 1056 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 TSHZ2Q9NRE2 1034 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 AATFQ9NY61 560 aaKnown RBP eCLIP6.84□□□□□ -1.32
CDKL5-205ENST00000623535 SH3BP1Q9Y3L3 701 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 CES5AQ6NT32 575 aa6.84□□□□□ -1.32
CDKL5-205ENST00000623535 LARSQ9P2J5 1176 aaKnown RBP6.84□□□□□ -1.32
CDKL5-205ENST00000623535 GNRH1P01148 92 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 RPS8P62241 208 aaKnown RBP6.83□□□□□ -1.32
CDKL5-205ENST00000623535 MXD4Q14582 209 aaPredicted RBP6.83□□□□□ -1.32
CDKL5-205ENST00000623535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDKL5-205ENST00000623535 CABLES1Q8TDN4 633 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 NUDCD1Q96RS6 583 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 CPB1P15086 417 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 KYAT1Q16773 422 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 CCDC183Q5T5S1 534 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 ASAP3Q8TDY4 903 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 PHF21AQ96BD5 680 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 USTQ9Y2C2 406 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 TTI1O43156 1089 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 TRAK2O60296 914 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 PSAPP07602 524 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 KCNV1Q6PIU1 500 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 FBXO11Q86XK2 927 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 USP26Q9BXU7 913 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 JAK1P23458 1154 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 NCKAP1LP55160 1127 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 PTPROQ16827 1216 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 CYP4A22Q5TCH4 519 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 CATSPER4Q7RTX7 472 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 ERO1AQ96HE7 468 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 SYNCRIPO60506 623 aaKnown RBP6.83□□□□□ -1.32
CDKL5-205ENST00000623535 HSPA6P17066 643 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 KRT15P19012 456 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 GOLGA8MH3BSY2 632 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 ARHGDIAP52565 204 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 SKP1P63208 163 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 UBXN1Q04323 297 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 STARD3Q14849 445 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 SLC9A5Q14940 896 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 INPP5FQ9Y2H2 1132 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 RNF123Q5XPI4 1314 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 RALBP11234 206 aa6.83□□□□□ -1.32
CDKL5-205ENST00000623535 TCF3P15923 654 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms