RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 NUP88Q99567 741 aaPredicted RBP8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 SLF1Q9BQI6 1058 aa8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 GOLPH3LQ9H4A5 285 aa8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 WBP1LQ9NX94 342 aa8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 MAP3K20Q9NYL2 800 aaKnown RBP8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 HPSEQ9Y251 543 aa8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 RABGAP1Q9Y3P9 1069 aa8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 STK24Q9Y6E0 443 aa8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 ASTN2O75129 1339 aaPredicted RBP8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 ABCB11O95342 1321 aa8.94□□□□□ -0.98
RPRD1B-208ENST00000618318 VWA3AA6NCI4 1184 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 UNCXA6NJT0 531 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 GCOM1H8Y6P7 765 aaPredicted RBP8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 PIK3CDO00329 1044 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 NEMFO60524 1076 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 SMC2O95347 1197 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 OR52Z1P0C646 297 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 POLR2MP0CAP2 368 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 HSPA8P11142 646 aaKnown RBP8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 PTPRAP18433 802 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 INPP5BP32019 993 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 UBA7P41226 1012 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 CLK2P49760 499 aaKnown RBP8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 VEGFBP49765 207 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 SPP2Q13103 211 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 ZYXQ15942 572 aaKnown RBP8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 MOXD1Q6UVY6 613 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 KRBA2Q6ZNG9 492 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 RASGRP2Q7LDG7 609 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 GAS2L3Q86XJ1 694 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 CKAP2LQ8IYA6 745 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 C12orf42Q96LP6 360 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 MAF1Q9H063 256 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 CSRNP2Q9H175 543 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 HOXC10Q9NYD6 342 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 KIAA1468Q9P260 1216 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 ZHX2Q9Y6X8 837 aa8.93□□□□□ -0.98
RPRD1B-208ENST00000618318 SIPA1L1O43166 1804 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 FAM205CA6NFA0 338 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 POLR2DO15514 142 aaKnown RBP8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 SLC26A4O43511 780 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 PPP1R11O60927 126 aaPredicted RBP8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 USP2O75604 605 aaPredicted RBP8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 FLOT1O75955 427 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 ICAM1P05362 532 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 ZNF76P36508 570 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 TPM4P67936 248 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 TYRO3Q06418 890 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 TTLL12Q14166 644 aaPredicted RBP8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 PDIA5Q14554 519 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 CALCRLQ16602 461 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 STX1AQ16623 288 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 USH1GQ495M9 461 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 CCDC174Q6PII3 467 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 LDHDQ86WU2 507 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 ANKRD13AQ8IZ07 590 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 C4orf32Q8N8J7 132 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 RASSF8Q8NHQ8 419 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 ANO3Q9BYT9 981 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 TANGO6Q9C0B7 1094 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 CCSER1Q9C0I3 900 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 RBSNQ9H1K0 784 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 CUEDC2Q9H467 287 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 PLSCR2Q9NRY7 297 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 DACH1Q9UI36 760 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 SCAF8Q9UPN6 1271 aaKnown RBP8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 MYH4Q9Y623 1939 aa8.92□□□□□ -0.98
RPRD1B-208ENST00000618318 BAZ2BQ9UIF8 2168 aaKnown RBP8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 TMEM88BA6NKF7 163 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 SMTNL1A8MU46 457 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L15C9J2P7 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L13C9JLJ4 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L11C9JVI0 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L18D6R9N7 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L22D6RA61 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L17D6RBQ6 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L19D6RCP7 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L20D6RJB6 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 GOLGA6L19H0YKK7 550 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 CXCL11O14625 94 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 TBX3O15119 743 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 ITGBL1O95965 494 aaPredicted RBP8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 SLFN14P0C7P3 912 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 XRCC6P12956 609 aaKnown RBP eCLIP8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 OAZ1P54368 228 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 AMPD3Q01432 767 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 MLLT1Q03111 559 aaPredicted RBP8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 PPATQ06203 517 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 USP17L24Q0WX57 530 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 SEMA3FQ13275 785 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 MTMR2Q13614 643 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 COG2Q14746 738 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 TKFCQ3LXA3 575 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 EAPPQ56P03 285 aaPredicted RBP8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 SH3D19Q5HYK7 790 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 CT47A1Q5JQC4 288 aaPredicted RBP8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 PRAMEF18Q5VWM3 479 aa8.91□□□□□ -0.98
RPRD1B-208ENST00000618318 RRAGBQ5VZM2 374 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms