RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 SALL3Q9BXA9 1300 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 FOXP2O15409 715 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 FKTNO75072 461 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 CTSHP09668 335 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 GUCY1A2P33402 732 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 SLC1A4P43007 532 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 SEC13P55735 322 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 IMMTQ16891 758 aaKnown RBP5.79□□□□□ -1.48
SYCP1-209ENST00000613524 EML3Q32P44 896 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 SLC9C1Q4G0N8 1177 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 SH3PXD2AQ5TCZ1 1133 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 FKBP1CQ5VVH2 108 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 AS3MTQ9HBK9 375 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 RAVER2Q9HCJ3 691 aaKnown RBP5.79□□□□□ -1.48
SYCP1-209ENST00000613524 STAP2Q9UGK3 403 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 PTCH2Q9Y6C5 1203 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 MRVI1Q9Y6F6 885 aa5.79□□□□□ -1.48
SYCP1-209ENST00000613524 PSME4Q14997 1843 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 ZBTB48P10074 688 aaPredicted RBP5.78□□□□□ -1.48
SYCP1-209ENST00000613524 CTGFP29279 349 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 TRIM32Q13049 653 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 ORC1Q13415 861 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 MTFR1Q15390 333 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 SWI5Q1ZZU3 235 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 LINC01559Q495D7 138 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 PTCRAQ6ISU1 281 aaPredicted RBP5.78□□□□□ -1.48
SYCP1-209ENST00000613524 CASC1Q6TDU7 716 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 NSMFQ6X4W1 530 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 MICU3Q86XE3 530 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 JMYQ8N9B5 988 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.78□□□□□ -1.48
SYCP1-209ENST00000613524 MRIQ9BWK5 157 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 PCDHGA11Q9Y5H2 935 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 F5H6K3 240 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 IFIT3O14879 490 aaKnown RBP5.78□□□□□ -1.48
SYCP1-209ENST00000613524 CA12O43570 354 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 NDUFB10O96000 172 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 IGHA2P01877 340 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 ALAS1P13196 640 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 FLT3LGP49771 235 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 HERVK_113P62684 666 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 KLRC3Q07444 240 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 PRAMEF19Q5SWL8 479 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 SLFN13Q68D06 897 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 RGL4Q8IZJ4 473 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 RUFY2Q8WXA3 655 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 TRIM47Q96LD4 638 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 PARK7Q99497 189 aaKnown RBP5.78□□□□□ -1.48
SYCP1-209ENST00000613524 DOLKQ9UPQ8 538 aa5.78□□□□□ -1.48
SYCP1-209ENST00000613524 PDS5AQ29RF7 1337 aaKnown RBP5.78□□□□□ -1.48
SYCP1-209ENST00000613524 CYP21A2P08686 494 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 UBXN2AP68543 259 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 EHHADHQ08426 723 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 CCL14Q16627 93 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 TMEM179Q6ZVK1 233 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 FASTKD5Q7L8L6 764 aaKnown RBP5.77□□□□□ -1.49
SYCP1-209ENST00000613524 LENG1Q96BZ8 264 aaPredicted RBP5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ABHD8Q96I13 439 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 NIF3L1Q9GZT8 377 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 TSPAN10Q9H1Z9 355 aaPredicted RBP5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ECM29Q5VYK3 1845 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 TLR2O60603 784 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 GNAT2P19087 354 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 BRD2P25440 801 aaKnown RBP5.77□□□□□ -1.49
SYCP1-209ENST00000613524 AKNAD1Q5T1N1 836 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 DMRTA1Q5VZB9 504 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 GPAT2Q6NUI2 795 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 C16orf86Q6ZW13 317 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 OTOP1Q7RTM1 612 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 DPP9Q86TI2 863 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 CCSER2Q9H7U1 834 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 HELLSQ9NRZ9 838 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ZSWIM5Q9P217 1185 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 UNC80Q8N2C7 3258 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ERCC3P19447 782 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ATP2B1P20020 1258 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 CYP2C19P33261 490 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 IRS1P35568 1242 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 BECN1Q14457 450 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ADCK5Q3MIX3 580 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 SNRNP48Q6IEG0 339 aaKnown RBP5.77□□□□□ -1.49
SYCP1-209ENST00000613524 CYB5R4Q7L1T6 521 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 AGBL1Q96MI9 1066 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 JAKMIP1Q96N16 626 aaKnown RBP5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ESYT1Q9BSJ8 1104 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 NBPF3Q9H094 633 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 RNF208Q9H0X6 261 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
SYCP1-209ENST00000613524 KAT14Q9H8E8 782 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 IL17RBQ9NRM6 502 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 AGTPBP1Q9UPW5 1226 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ZSWIM8A7E2V4 1837 aa5.77□□□□□ -1.49
SYCP1-209ENST00000613524 ATRNL1Q5VV63 1379 aa5.76□□□□□ -1.49
SYCP1-209ENST00000613524 PAPPA2Q9BXP8 1791 aa5.76□□□□□ -1.49
SYCP1-209ENST00000613524 TNKSO95271 1327 aa5.76□□□□□ -1.49
SYCP1-209ENST00000613524 A0A0G2JLL6 359 aaPredicted RBP5.76□□□□□ -1.49
SYCP1-209ENST00000613524 PTPDC1A2A3K4 754 aa5.76□□□□□ -1.49
SYCP1-209ENST00000613524 CDC45O75419 566 aa5.76□□□□□ -1.49
SYCP1-209ENST00000613524 TM4SF4P48230 202 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms