RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 FCHSD1Q86WN1 690 aa13.83□□□□□ -0.19
CLK4-215ENST00000611733 SHCBP1Q8NEM2 672 aa13.83□□□□□ -0.19
CLK4-215ENST00000611733 CCDC12Q8WUD4 166 aaPredicted RBP13.83□□□□□ -0.19
CLK4-215ENST00000611733 CUL5Q93034 780 aa13.83□□□□□ -0.19
CLK4-215ENST00000611733 CFHR5Q9BXR6 569 aa13.83□□□□□ -0.19
CLK4-215ENST00000611733 MROH8Q9H579 483 aa13.83□□□□□ -0.19
CLK4-215ENST00000611733 WBP1LQ9NX94 342 aa13.83□□□□□ -0.19
CLK4-215ENST00000611733 GCOM1H8Y6P7 765 aaPredicted RBP13.83□□□□□ -0.2
CLK4-215ENST00000611733 POLR2MP0CAP2 368 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 CLK2P49760 499 aaKnown RBP13.83□□□□□ -0.2
CLK4-215ENST00000611733 HSD17B4P51659 736 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 MRPL12P52815 198 aaKnown RBP13.83□□□□□ -0.2
CLK4-215ENST00000611733 CCNA1P78396 465 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 CNTN2Q02246 1040 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 TRAF1Q13077 416 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 FAM173BQ6P4H8 233 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 ANKRD35Q8N283 1001 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 SYTL5Q8TDW5 730 aaPredicted RBP13.83□□□□□ -0.2
CLK4-215ENST00000611733 TNFRSF25Q93038 417 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 CYP39A1Q9NYL5 469 aa13.83□□□□□ -0.2
CLK4-215ENST00000611733 GNA11P29992 359 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 KRT2P35908 639 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 MAP2K1Q02750 393 aaPredicted RBP13.82□□□□□ -0.2
CLK4-215ENST00000611733 CCAR1Q8IX12 1150 aaKnown RBP13.82□□□□□ -0.2
CLK4-215ENST00000611733 DAGLBQ8NCG7 672 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 CHAMP1Q96JM3 812 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 TAAR1Q96RJ0 339 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 PNMA2Q9UL42 364 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 GPR25O00155 361 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 BRD1O95696 1058 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 MCF2L2Q86YR7 1114 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 ZFP91Q96JP5 570 aaPredicted RBP13.82□□□□□ -0.2
CLK4-215ENST00000611733 MMP19Q99542 508 aa13.82□□□□□ -0.2
CLK4-215ENST00000611733 PIK3CDO00329 1044 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 EDIL3O43854 480 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 COBLO75128 1261 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 ZSCAN22P10073 491 aaPredicted RBP13.81□□□□□ -0.2
CLK4-215ENST00000611733 UBXN2AP68543 259 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 LACTBP83111 547 aaPredicted RBP13.81□□□□□ -0.2
CLK4-215ENST00000611733 SP3Q02447 781 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 GHRHRQ02643 423 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 RESTQ13127 1097 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 FOXD4L6Q3SYB3 417 aaPredicted RBP13.81□□□□□ -0.2
CLK4-215ENST00000611733 FOXD4L3Q6VB84 417 aaPredicted RBP13.81□□□□□ -0.2
CLK4-215ENST00000611733 PLEKHH3Q7Z736 793 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 REXO1Q8N1G1 1221 aaKnown RBP13.81□□□□□ -0.2
CLK4-215ENST00000611733 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 ASTN1O14525 1302 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 WNT7AO00755 349 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 FCER1AP12319 257 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 PTPREP23469 700 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.21e-7■□□□□ 8
CLK4-215ENST00000611733 MAPK4P31152 587 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 PSMC4P43686 418 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLK4-215ENST00000611733 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 PIK3AP1Q6ZUJ8 805 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 SAGE1Q9NXZ1 904 aa13.81□□□□□ -0.2
CLK4-215ENST00000611733 ZSWIM8A7E2V4 1837 aa13.8□□□□□ -0.2
CLK4-215ENST00000611733 SOWAHBA6NEL2 793 aa13.8□□□□□ -0.2
CLK4-215ENST00000611733 ADORA2AP29274 412 aa13.8□□□□□ -0.2
CLK4-215ENST00000611733 KCTD2Q14681 263 aa13.8□□□□□ -0.2
CLK4-215ENST00000611733 CD99L2Q8TCZ2 262 aa13.8□□□□□ -0.2
CLK4-215ENST00000611733 ZNF296Q8WUU4 475 aaPredicted RBP13.8□□□□□ -0.2
CLK4-215ENST00000611733 FGD4Q96M96 766 aa13.8□□□□□ -0.2
CLK4-215ENST00000611733 FOXP1Q9H334 677 aaPredicted RBP13.8□□□□□ -0.2
CLK4-215ENST00000611733 DNAJC25-GNG10A0A024R161 153 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 COPB2P35606 906 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLK4-215ENST00000611733 NOSTRINQ8IVI9 506 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 FAM177A1Q8N128 213 aaPredicted RBP13.79□□□□□ -0.2
CLK4-215ENST00000611733 BICD2Q8TD16 824 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 ANO3Q9BYT9 981 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 TNPO2O14787 897 aaKnown RBP13.79□□□□□ -0.2
CLK4-215ENST00000611733 F13A1P00488 732 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
CLK4-215ENST00000611733 GRB14Q14449 540 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 NBR1Q14596 966 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 INF2Q27J81 1249 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 MORN1Q5T089 497 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 FAM133AQ8N9E0 248 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 BRMS1Q9HCU9 246 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 GABRQQ9UN88 632 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
CLK4-215ENST00000611733 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 STRNO43815 780 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
CLK4-215ENST00000611733 ATP2B1P20020 1258 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 TOB1P50616 345 aaPredicted RBP13.78□□□□□ -0.2
CLK4-215ENST00000611733 JMYQ8N9B5 988 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 TBCKQ8TEA7 893 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 RMDN3Q96TC7 470 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms