RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 NLRP7Q8WX94 980 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 NCAPGQ9BPX3 1015 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 ASIC3Q9UHC3 531 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 SLC12A6Q9UHW9 1150 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 FNDC3AQ9Y2H6 1198 aaKnown RBP12.11□□□□□ -0.47
SHANK2-219ENST00000606715 PCDHA1Q9Y5I3 950 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 QRICH2Q9H0J4 1663 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 ZNF202O95125 648 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 SEC24BO95487 1268 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-219ENST00000606715 C1orf112Q9NSG2 853 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 KCNJ14Q9UNX9 436 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 PNPLA6Q8IY17 1366 aa12.11□□□□□ -0.47
SHANK2-219ENST00000606715 ZBTB7AO95365 584 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 IVLP07476 585 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 MIS18BP1Q6P0N0 1132 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 NME8Q8N427 588 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 SPATA31A5Q5VU36 1347 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 SPATA31A7Q8IWB4 1347 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 ANXA13P27216 316 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 PPP2R5AQ15172 486 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 SLC9C1Q4G0N8 1177 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 ADALQ6DHV7 355 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 RAB3IPQ96QF0 476 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-219ENST00000606715 SNX25Q9H3E2 840 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 AKR1B15C9JRZ8 316 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-219ENST00000606715 DPYSL4O14531 572 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 PTH1RQ03431 593 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 POSTNQ15063 836 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 HADHQ16836 314 aaKnown RBP12.1□□□□□ -0.47
SHANK2-219ENST00000606715 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 ATP8B3O60423 1300 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 SYNRGQ9UMZ2 1314 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 ATP6V0A1Q93050 837 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.1□□□□□ -0.47
SHANK2-219ENST00000606715 IFNKQ9P0W0 207 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 ERCC3P19447 782 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 LACTBP83111 547 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-219ENST00000606715 ME3Q16798 604 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 FYB2Q5VWT5 728 aa12.1□□□□□ -0.47
SHANK2-219ENST00000606715 LARSQ9P2J5 1176 aaKnown RBP12.1□□□□□ -0.47
SHANK2-219ENST00000606715 INO80B-WBP1J3KQ70 363 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 NLRP12P59046 1061 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 APOBEC3FQ8IUX4 373 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 RSAD2Q8WXG1 361 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 INO80BQ9C086 356 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 CIB2O75838 187 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 SLC7A3Q8WY07 619 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 IPO11Q9UI26 975 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 ANAPC5Q9UJX4 755 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 CPSF3Q9UKF6 684 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 UTP11Q9Y3A2 253 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 FER1L4A9Z1Z3 1794 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 DLATP10515 647 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 BMP3P12645 472 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 CCND2P30279 289 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 CPLX4Q7Z7G2 160 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 PALM2Q8IXS6 379 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 HAUS1Q96CS2 278 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 ARFGAP3Q9NP61 516 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 C21orf2O43822 256 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 LSG1Q9H089 658 aaKnown RBP12.09□□□□□ -0.47
SHANK2-219ENST00000606715 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
SHANK2-219ENST00000606715 KIDINS220Q9ULH0 1771 aa12.08□□□□□ -0.47
SHANK2-219ENST00000606715 ASNSP08243 561 aa12.08□□□□□ -0.47
SHANK2-219ENST00000606715 SDCCAG8Q86SQ7 713 aaPredicted RBP12.08□□□□□ -0.47
SHANK2-219ENST00000606715 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.47
SHANK2-219ENST00000606715 SOS2Q07890 1332 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-219ENST00000606715 N4BP1O75113 896 aaKnown RBP12.08□□□□□ -0.48
SHANK2-219ENST00000606715 MCM6Q14566 821 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 TRIML1Q8N9V2 468 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 DISC1Q9NRI5 854 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 S100BP04271 92 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-219ENST00000606715 GOLGA8HP0CJ92 632 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 RPS6KA2Q15349 733 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-219ENST00000606715 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 RAB20Q9NX57 234 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 DDX25Q9UHL0 483 aaKnown RBP12.08□□□□□ -0.48
SHANK2-219ENST00000606715 SPATA31D1Q6ZQQ2 1576 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 RGS12O14924 1447 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 KCNQ4P56696 695 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 RNASE9P60153 205 aaKnown RBP12.08□□□□□ -0.48
SHANK2-219ENST00000606715 KLHL30Q0D2K2 578 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 TUBB2AQ13885 445 aa12.08□□□□□ -0.48
SHANK2-219ENST00000606715 MAIP1Q8WWC4 291 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms