RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 KIF5BP33176 963 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 HSPA4P34932 840 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 ADCYAP1R1P41586 468 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 LIFRP42702 1097 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 LRRC26Q2I0M4 334 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 DHX32Q7L7V1 743 aaKnown RBP16.73■□□□□ 0.27
TUBE1-204ENST00000603621 MCF2L2Q86YR7 1114 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
TUBE1-204ENST00000603621 MTMR8Q96EF0 704 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 PDGFCQ9NRA1 345 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 PCDHA1Q9Y5I3 950 aa16.73■□□□□ 0.27
TUBE1-204ENST00000603621 SYNRGQ9UMZ2 1314 aa16.72■□□□□ 0.27
TUBE1-204ENST00000603621 DUSP11O75319 330 aaKnown RBP16.72■□□□□ 0.27
TUBE1-204ENST00000603621 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
TUBE1-204ENST00000603621 EXOSC10Q01780 885 aaKnown RBP16.72■□□□□ 0.27
TUBE1-204ENST00000603621 TNFAIP2Q03169 654 aa16.72■□□□□ 0.27
TUBE1-204ENST00000603621 SYNE3Q6ZMZ3 975 aa16.72■□□□□ 0.27
TUBE1-204ENST00000603621 RGS22Q8NE09 1264 aa16.72■□□□□ 0.27
TUBE1-204ENST00000603621 JAKMIP1Q96N16 626 aaKnown RBP16.72■□□□□ 0.27
TUBE1-204ENST00000603621 TAAR1Q96RJ0 339 aa16.72■□□□□ 0.27
TUBE1-204ENST00000603621 ZMYND8Q9ULU4 1186 aaPredicted RBP16.72■□□□□ 0.27
TUBE1-204ENST00000603621 SNX14Q9Y5W7 946 aa16.72■□□□□ 0.27
TUBE1-204ENST00000603621 PNMA6FA0A0J9YX94 578 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 C6orf222P0C671 652 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-204ENST00000603621 CALM1P0DP23 149 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 CALM2P0DP24 149 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 CALM3P0DP25 149 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 SYN1P17600 705 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 FGD1P98174 961 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 PDE4DQ08499 809 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 MICU3Q86XE3 530 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-204ENST00000603621 MPHOSPH6Q99547 160 aaKnown RBP16.71■□□□□ 0.27
TUBE1-204ENST00000603621 MAP3K14Q99558 947 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 SPC25Q9HBM1 224 aa16.71■□□□□ 0.27
TUBE1-204ENST00000603621 NAP1L2Q9ULW6 460 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-204ENST00000603621 MYADML2A6NDP7 307 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 HMGB1P09429 215 aaKnown RBP16.7■□□□□ 0.26
TUBE1-204ENST00000603621 PTGS1P23219 599 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 GNAQP50148 359 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 TMEM63BQ5T3F8 832 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 SLC39A5Q6ZMH5 540 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
TUBE1-204ENST00000603621 DNERQ8NFT8 737 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 MORC4Q8TE76 937 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
TUBE1-204ENST00000603621 VTA1Q9NP79 307 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 COL20A1Q9P218 1284 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 PCDH10Q9P2E7 1040 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 ATP11BQ9Y2G3 1177 aa16.7■□□□□ 0.26
TUBE1-204ENST00000603621 B4DLN1 442 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 DYNC1LI2O43237 492 aaPredicted RBP16.69■□□□□ 0.26
TUBE1-204ENST00000603621 SMPD1P17405 629 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 HOXA13P31271 388 aaPredicted RBP16.69■□□□□ 0.26
TUBE1-204ENST00000603621 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
TUBE1-204ENST00000603621 RTP1P59025 263 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 BEX3Q00994 111 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 TRAF1Q13077 416 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 KCNA10Q16322 511 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 GNASQ5JWF2 1037 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 ARHGEF16Q5VV41 709 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 SGMS1Q86VZ5 419 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 KCNB2Q92953 911 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 RMDN3Q96TC7 470 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
TUBE1-204ENST00000603621 BRPF3Q9ULD4 1205 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 PHF24Q9UPV7 400 aa16.69■□□□□ 0.26
TUBE1-204ENST00000603621 KIAA1217Q5T5P2 1943 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 LOC102724159A0A0B4J2E5 919 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 A0A1W2PQ45 241 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-204ENST00000603621 A0A1W2PQY0 241 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 OPLAHO14841 1288 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
TUBE1-204ENST00000603621 ACLYP53396 1101 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 GJA9P57773 515 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 PWP2Q15269 919 aaKnown RBP16.68■□□□□ 0.26
TUBE1-204ENST00000603621 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 Q6ZUG5 572 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 KLHDC9Q8NEP7 349 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
TUBE1-204ENST00000603621 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 WDR11Q9BZH6 1224 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
TUBE1-204ENST00000603621 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
TUBE1-204ENST00000603621 GNEQ9Y223 722 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms