RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 TCP11L1Q9NUJ3 509 aa23.81■■□□□ 1.4
PPFIA3-204ENST00000602492 UMODL1Q5DID0 1318 aa23.81■■□□□ 1.4
PPFIA3-204ENST00000602492 FRMPD2Q68DX3 1309 aaPredicted RBP23.81■■□□□ 1.4
PPFIA3-204ENST00000602492 PTPDC1A2A3K4 754 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 FGBP02675 491 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 PSMC6P62333 389 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 RAB30Q15771 203 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 DUSP28Q4G0W2 176 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 USP38Q8NB14 1042 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 SYMPKQ92797 1274 aaKnown RBP23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 MSRAQ9UJ68 235 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 PNMA2Q9UL42 364 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 ZMYM6O95789 1325 aa23.8■■□□□ 1.4
PPFIA3-204ENST00000602492 B4GALT4O60513 344 aa23.79■■□□□ 1.4
PPFIA3-204ENST00000602492 HSPD1P10809 573 aaKnown RBP23.79■■□□□ 1.4
PPFIA3-204ENST00000602492 CCL23P55773 120 aa23.79■■□□□ 1.4
PPFIA3-204ENST00000602492 CRBNQ96SW2 442 aa23.79■■□□□ 1.4
PPFIA3-204ENST00000602492 WDR11Q9BZH6 1224 aa23.79■■□□□ 1.4
PPFIA3-204ENST00000602492 CXXC1Q9P0U4 656 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-204ENST00000602492 HAND2P61296 217 aa23.78■■□□□ 1.4
PPFIA3-204ENST00000602492 HDAC1Q13547 482 aaPredicted RBP23.78■■□□□ 1.4
PPFIA3-204ENST00000602492 POLR3EQ9NVU0 708 aa23.78■■□□□ 1.4
PPFIA3-204ENST00000602492 PDHBP11177 359 aa23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 CALML3P27482 149 aa23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 NMIQ13287 307 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 SLC30A10Q6XR72 485 aa23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 ZNF589Q86UQ0 364 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 WNT8AQ9H1J5 351 aa23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 ALDH8A1Q9H2A2 487 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 PRDM12Q9H4Q4 367 aa23.77■■□□□ 1.4
PPFIA3-204ENST00000602492 RBM47A0AV96 593 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 PCP11498 1178 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 CPT1AP50416 773 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 ZNF543Q08ER8 600 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 AKNAD1Q5T1N1 836 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 RNF207Q6ZRF8 634 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 MFSD6Q6ZSS7 791 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 OTOP2Q7RTS6 562 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 RPUSD2Q8IZ73 545 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 CLEC4DQ8WXI8 215 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 TTC14Q96N46 770 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 MPHOSPH6Q99547 160 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 CCDC171Q6TFL3 1326 aa23.76■■□□□ 1.39
PPFIA3-204ENST00000602492 TRIM6-TRIM34B2RNG4 842 aa23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 MYL3P08590 195 aa23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 SUPT20HL2P0C7V6 817 aa23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 PDE4DQ08499 809 aa23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 TJAP1Q5JTD0 557 aa23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 OR6J1Q8NGC5 347 aa23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 GPHNQ9NQX3 736 aaPredicted RBP23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 WDR19Q8NEZ3 1342 aa23.75■■□□□ 1.39
PPFIA3-204ENST00000602492 PURAQ00577 322 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-204ENST00000602492 BRDTQ58F21 947 aaPredicted RBP23.74■■□□□ 1.39
PPFIA3-204ENST00000602492 NKX2-4Q9H2Z4 354 aa23.74■■□□□ 1.39
PPFIA3-204ENST00000602492 RNF41Q9H4P4 317 aaPredicted RBP23.74■■□□□ 1.39
PPFIA3-204ENST00000602492 SLC28A3Q9HAS3 691 aa23.74■■□□□ 1.39
PPFIA3-204ENST00000602492 CHD7Q9P2D1 2997 aa23.74■■□□□ 1.39
PPFIA3-204ENST00000602492 NKRFO15226 690 aaKnown RBP eCLIP23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 SNHG28P0DPA3 235 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 MFAP1P55081 439 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 RPS6P62753 249 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 PPP2R5BQ15173 497 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 TBC1D10CQ8IV04 446 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 PPM1EQ8WY54 764 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 RILPL2Q969X0 211 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 SCLYQ96I15 445 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 MTG1Q9BT17 334 aaPredicted RBP23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 LNPKQ9C0E8 428 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 TRMT13Q9NUP7 481 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 SLC4A7Q9Y6M7 1214 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 TNKSO95271 1327 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 RAD50Q92878 1312 aa23.73■■□□□ 1.39
PPFIA3-204ENST00000602492 NCOR1O75376 2440 aa23.72■■□□□ 1.39
PPFIA3-204ENST00000602492 GPATCH4Q5T3I0 446 aaKnown RBP23.72■■□□□ 1.39
PPFIA3-204ENST00000602492 DNERQ8NFT8 737 aa23.72■■□□□ 1.39
PPFIA3-204ENST00000602492 SCFD2Q8WU76 684 aa23.72■■□□□ 1.39
PPFIA3-204ENST00000602492 ESR2Q92731 530 aa23.72■■□□□ 1.39
PPFIA3-204ENST00000602492 YBX2Q9Y2T7 364 aaKnown RBP23.72■■□□□ 1.39
PPFIA3-204ENST00000602492 ZBBXA8MT70 800 aa23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 B4DLN1 442 aa23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 PFKMP08237 780 aa23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 CYP2C9P11712 490 aa23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 EDNRBP24530 442 aa23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 MRPL12P52815 198 aaKnown RBP23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 FAM47CQ5HY64 1035 aa23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 PRDM6Q9NQX0 595 aa23.71■■□□□ 1.39
PPFIA3-204ENST00000602492 KPNA6O60684 536 aa23.7■■□□□ 1.38
PPFIA3-204ENST00000602492 IGFBP4P22692 258 aa23.7■■□□□ 1.38
PPFIA3-204ENST00000602492 ADGRE1Q14246 886 aa23.7■■□□□ 1.38
PPFIA3-204ENST00000602492 SCN10AQ9Y5Y9 1956 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 NEDD4P46934 1319 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 RABGGTBP53611 331 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 NBPF20Q3BBV1 942 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 USH1GQ495M9 461 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 DGKHQ86XP1 1220 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 VWCEQ96DN2 955 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 ZKSCAN3Q9BRR0 538 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 PCDHA11Q9Y5I1 949 aa23.69■■□□□ 1.38
PPFIA3-204ENST00000602492 GBF1Q92538 1859 aa23.68■■□□□ 1.38
PPFIA3-204ENST00000602492 A6NJR5 290 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms