RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 PDIA3P30101 505 aaKnown RBP23.24■■□□□ 1.31
SSBP4-210ENST00000601444 METAP2P50579 478 aaKnown RBP eCLIP23.24■■□□□ 1.31
SSBP4-210ENST00000601444 ARMCX2Q7L311 632 aa23.24■■□□□ 1.31
SSBP4-210ENST00000601444 MSL3Q8N5Y2 521 aaKnown RBP23.24■■□□□ 1.31
SSBP4-210ENST00000601444 RGS22Q8NE09 1264 aa23.24■■□□□ 1.31
SSBP4-210ENST00000601444 CRISPLD2Q9H0B8 497 aa23.24■■□□□ 1.31
SSBP4-210ENST00000601444 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.24■■□□□ 1.31
SSBP4-210ENST00000601444 COL20A1Q9P218 1284 aa23.24■■□□□ 1.31
SSBP4-210ENST00000601444 SYNGAP1Q96PV0 1343 aa23.24■■□□□ 1.31
SSBP4-210ENST00000601444 RCAN1P53805 252 aa23.23■■□□□ 1.31
SSBP4-210ENST00000601444 EVCP57679 992 aa23.23■■□□□ 1.31
SSBP4-210ENST00000601444 CNTNAP5Q8WYK1 1306 aa23.23■■□□□ 1.31
SSBP4-210ENST00000601444 LCTP09848 1927 aa23.23■■□□□ 1.31
SSBP4-210ENST00000601444 CFBP00751 764 aa23.22■■□□□ 1.31
SSBP4-210ENST00000601444 CCT2P78371 535 aaKnown RBP23.22■■□□□ 1.31
SSBP4-210ENST00000601444 MCF2L2Q86YR7 1114 aa23.22■■□□□ 1.31
SSBP4-210ENST00000601444 SYTL5Q8TDW5 730 aaPredicted RBP23.22■■□□□ 1.31
SSBP4-210ENST00000601444 SEC63Q9UGP8 760 aaKnown RBP23.22■■□□□ 1.31
SSBP4-210ENST00000601444 DDX20Q9UHI6 824 aaKnown RBP23.22■■□□□ 1.31
SSBP4-210ENST00000601444 CNPY2Q9Y2B0 182 aa23.22■■□□□ 1.31
SSBP4-210ENST00000601444 ALDH5A1P51649 535 aaPredicted RBP23.21■■□□□ 1.31
SSBP4-210ENST00000601444 ACVR2BQ13705 512 aa23.21■■□□□ 1.31
SSBP4-210ENST00000601444 TAAR1Q96RJ0 339 aa23.21■■□□□ 1.31
SSBP4-210ENST00000601444 KATNBL1Q9H079 304 aa23.21■■□□□ 1.31
SSBP4-210ENST00000601444 NCOA5Q9HCD5 579 aaKnown RBP23.21■■□□□ 1.31
SSBP4-210ENST00000601444 ZHX1Q9UKY1 873 aaPredicted RBP23.21■■□□□ 1.31
SSBP4-210ENST00000601444 V9GY48 417 aaPredicted RBP23.21■■□□□ 1.31
SSBP4-210ENST00000601444 MYH6P13533 1939 aa23.21■■□□□ 1.31
SSBP4-210ENST00000601444 MKI67P46013 3256 aaKnown RBP23.21■■□□□ 1.31
SSBP4-210ENST00000601444 ASB14A6NK59 587 aa23.2■■□□□ 1.3
SSBP4-210ENST00000601444 SEPT4O43236 478 aa23.2■■□□□ 1.3
SSBP4-210ENST00000601444 PPFIA3O75145 1194 aa23.2■■□□□ 1.3
SSBP4-210ENST00000601444 HOXA13P31271 388 aaPredicted RBP23.2■■□□□ 1.3
SSBP4-210ENST00000601444 EEPD1Q7L9B9 569 aa23.2■■□□□ 1.3
SSBP4-210ENST00000601444 LENG1Q96BZ8 264 aaPredicted RBP23.2■■□□□ 1.3
SSBP4-210ENST00000601444 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
SSBP4-210ENST00000601444 NRBP1Q9UHY1 535 aa23.2■■□□□ 1.3
SSBP4-210ENST00000601444 OGDHLQ9ULD0 1010 aa23.2■■□□□ 1.3
SSBP4-210ENST00000601444 KIAA0100Q14667 2235 aaKnown RBP23.2■■□□□ 1.3
SSBP4-210ENST00000601444 NID2Q14112 1375 aa23.19■■□□□ 1.3
SSBP4-210ENST00000601444 HSD17B4P51659 736 aa23.19■■□□□ 1.3
SSBP4-210ENST00000601444 AK2P54819 239 aa23.19■■□□□ 1.3
SSBP4-210ENST00000601444 STK3Q13188 491 aa23.19■■□□□ 1.3
SSBP4-210ENST00000601444 GPKOWQ92917 476 aaPredicted RBP eCLIP23.19■■□□□ 1.3
SSBP4-210ENST00000601444 ABHD16BQ9H3Z7 469 aa23.19■■□□□ 1.3
SSBP4-210ENST00000601444 MNX1P50219 401 aaPredicted RBP23.18■■□□□ 1.3
SSBP4-210ENST00000601444 GHRHRQ02643 423 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 TRAF1Q13077 416 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 PPP2R5BQ15173 497 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 NTRK3Q16288 839 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 MORC4Q8TE76 937 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 DIS3LQ8TF46 1054 aaKnown RBP23.18■■□□□ 1.3
SSBP4-210ENST00000601444 ZNF274Q96GC6 653 aaPredicted RBP23.18■■□□□ 1.3
SSBP4-210ENST00000601444 KIF2CQ99661 725 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 C22orf23Q9BZE7 217 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 ALDH8A1Q9H2A2 487 aaPredicted RBP23.18■■□□□ 1.3
SSBP4-210ENST00000601444 TPCN1Q9ULQ1 816 aa23.18■■□□□ 1.3
SSBP4-210ENST00000601444 CCDC196A0A1B0GTZ2 297 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 ADCY6O43306 1168 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 NEK4P51957 841 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 HEATR3Q7Z4Q2 680 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 UBE2Q1Q7Z7E8 422 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 FBXO16Q8IX29 292 aaPredicted RBP23.17■■□□□ 1.3
SSBP4-210ENST00000601444 DNERQ8NFT8 737 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 PHKBQ93100 1093 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 MAF1Q9H063 256 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 PDGFCQ9NRA1 345 aa23.17■■□□□ 1.3
SSBP4-210ENST00000601444 GCOM1H8Y6P7 765 aaPredicted RBP23.16■■□□□ 1.3
SSBP4-210ENST00000601444 MSCO60682 206 aa23.16■■□□□ 1.3
SSBP4-210ENST00000601444 POLR2MP0CAP2 368 aa23.16■■□□□ 1.3
SSBP4-210ENST00000601444 CCDC144BQ3MJ40 725 aa23.16■■□□□ 1.3
SSBP4-210ENST00000601444 TMEM63BQ5T3F8 832 aa23.16■■□□□ 1.3
SSBP4-210ENST00000601444 WWC2Q6AWC2 1192 aa23.16■■□□□ 1.3
SSBP4-210ENST00000601444 TYW1BQ6NUM6 668 aa23.16■■□□□ 1.3
SSBP4-210ENST00000601444 NOL8Q76FK4 1167 aaKnown RBP23.16■■□□□ 1.3
SSBP4-210ENST00000601444 RMDN3Q96TC7 470 aa23.16■■□□□ 1.3
SSBP4-210ENST00000601444 MCM3APO60318 1980 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-210ENST00000601444 FARP2O94887 1054 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-210ENST00000601444 AKR1A1P14550 325 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 PTGS1P23219 599 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 EDNRBP24530 442 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 MLLT1Q03111 559 aaPredicted RBP23.15■■□□□ 1.3
SSBP4-210ENST00000601444 TAPT1Q6NXT6 567 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 USP17L6PQ6QN14 398 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 FCHSD1Q86WN1 690 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 PAWRQ96IZ0 340 aaKnown RBP23.15■■□□□ 1.3
SSBP4-210ENST00000601444 FAM184BQ9ULE4 1060 aa23.15■■□□□ 1.3
SSBP4-210ENST00000601444 DTNBO60941 627 aa23.14■■□□□ 1.29
SSBP4-210ENST00000601444 EIF2AK2P19525 551 aaKnown RBP23.14■■□□□ 1.29
SSBP4-210ENST00000601444 ADCYAP1R1P41586 468 aa23.14■■□□□ 1.29
SSBP4-210ENST00000601444 RBM25P49756 843 aaKnown RBP23.14■■□□□ 1.29
SSBP4-210ENST00000601444 PDE4DQ08499 809 aa23.14■■□□□ 1.29
SSBP4-210ENST00000601444 ARHGEF16Q5VV41 709 aa23.14■■□□□ 1.29
SSBP4-210ENST00000601444 NSUN6Q8TEA1 469 aaKnown RBP23.14■■□□□ 1.29
SSBP4-210ENST00000601444 PXMP2Q9NR77 195 aa23.14■■□□□ 1.29
SSBP4-210ENST00000601444 MAP3K20Q9NYL2 800 aaKnown RBP23.14■■□□□ 1.29
SSBP4-210ENST00000601444 MEIS2O14770 477 aa23.13■■□□□ 1.29
SSBP4-210ENST00000601444 PGK1P00558 417 aa23.13■■□□□ 1.29
SSBP4-210ENST00000601444 MYCNP04198 464 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms