RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 KRT25Q7Z3Z0 450 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 VPS36Q86VN1 386 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 TEX11Q8IYF3 940 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 DDX12PQ92771 950 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 TRIM4Q9C037 500 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 CENPHQ9H3R5 247 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 SENP2Q9HC62 589 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 MKS1Q9NXB0 559 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 SALL1Q9NSC2 1324 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 CYP2D7A0A087X1C5 515 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.57
LIG1-220ENST00000601091 PHACTR1Q9C0D0 580 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 IRF2BPLQ9H1B7 796 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 SAP30BPQ9UHR5 308 aaKnown RBP11.52□□□□□ -0.57
LIG1-220ENST00000601091 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.57
LIG1-220ENST00000601091 EPN1Q9Y6I3 576 aaPredicted RBP11.52□□□□□ -0.57
LIG1-220ENST00000601091 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 SEMA3EO15041 775 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 COBLO75128 1261 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 CYP2C19P33261 490 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 DNM2P50570 870 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 CABP7Q86V35 215 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 VPS37AQ8NEZ2 397 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 JAKMIP2Q96AA8 810 aa11.52□□□□□ -0.57
LIG1-220ENST00000601091 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
LIG1-220ENST00000601091 MAGEA9P43362 315 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 NAA25Q14CX7 972 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 CCDC92Q53HC0 331 aaPredicted RBP11.51□□□□□ -0.57
LIG1-220ENST00000601091 ILDR1Q86SU0 546 aaPredicted RBP11.51□□□□□ -0.57
LIG1-220ENST00000601091 UIMC1Q96RL1 719 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 TSGA10Q9BZW7 698 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 HAUS4Q9H6D7 363 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 MAP3K20Q9NYL2 800 aaKnown RBP11.51□□□□□ -0.57
LIG1-220ENST00000601091 FBXO2Q9UK22 296 aaPredicted RBP11.51□□□□□ -0.57
LIG1-220ENST00000601091 MROH7-TTC4A0A0A0MT08 1334 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 PNPLA7Q6ZV29 1317 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 GNPATO15228 680 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 PPP1R12BO60237 982 aaPredicted RBP11.51□□□□□ -0.57
LIG1-220ENST00000601091 ERLIN2O94905 339 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 PLEKHA8P1O95397 391 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 RRM1P23921 792 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 TXKP42681 527 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 TNNI2P48788 182 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 OLFML1Q6UWY5 402 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 PAF1Q8N7H5 531 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 KIAA0754O94854 1291 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 DEUP1Q05D60 604 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 ACBD5Q5T8D3 534 aaPredicted RBP11.51□□□□□ -0.57
LIG1-220ENST00000601091 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 ENAHQ8N8S7 591 aaPredicted RBP11.51□□□□□ -0.57
LIG1-220ENST00000601091 GPKOWQ92917 476 aaPredicted RBP eCLIP11.51□□□□□ -0.571e-9■■■■■ 32.6
LIG1-220ENST00000601091 SCLT1Q96NL6 688 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 BRIP1Q9BX63 1249 aa11.51□□□□□ -0.57
LIG1-220ENST00000601091 A0A1B0GUA9 196 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 COPB2P35606 906 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 PTPAQ15257 358 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 C11orf96Q7Z7L8 435 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 SRLQ86TD4 932 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 SLC35F6Q8N357 371 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 VMP1Q96GC9 406 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 CCDC114Q96M63 670 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 PARD6BQ9BYG5 372 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 UBA5Q9GZZ9 404 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 THRAP3Q9Y2W1 955 aaKnown RBP11.5□□□□□ -0.57
LIG1-220ENST00000601091 SAR1BQ9Y6B6 198 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 CCDC151A5D8V7 595 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 CLNS1AP54105 237 aaKnown RBP11.5□□□□□ -0.57
LIG1-220ENST00000601091 ZNF658Q5TYW1 1059 aaPredicted RBP11.5□□□□□ -0.57
LIG1-220ENST00000601091 TOGARAM2Q6ZUX3 1019 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 KIF9Q9HAQ2 790 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 MYO1AQ9UBC5 1043 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 IP6K2Q9UHH9 426 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 RWDD2AQ9UIY3 292 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 HLA-DOAP06340 250 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 FAM163BP0C2L3 166 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 CDC25AP30304 524 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 KBTBD12Q3ZCT8 623 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 TCERG1LQ5VWI1 586 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 NEK9Q8TD19 979 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 PARD3BQ8TEW8 1205 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 SPAG5Q96R06 1193 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 MRGBPQ9NV56 204 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 LRWD1Q9UFC0 647 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 HPSEQ9Y251 543 aa11.5□□□□□ -0.57
LIG1-220ENST00000601091 ENO4A6NNW6 628 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 CASP1P29466 404 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 PICALMQ13492 652 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 ODF2Q5BJF6 829 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 ZCCHC8Q6NZY4 707 aaKnown RBP11.49□□□□□ -0.57
LIG1-220ENST00000601091 TMTC3Q6ZXV5 915 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
LIG1-220ENST00000601091 SMCO2A6NFE2 343 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 SLMAPQ14BN4 828 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 LONRF2Q1L5Z9 754 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 MAPKAPK5Q8IW41 473 aa11.49□□□□□ -0.57
LIG1-220ENST00000601091 WDR75Q8IWA0 830 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms