RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 NOVP48745 357 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 ALDH5A1P51649 535 aaPredicted RBP12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 PDE1AP54750 535 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 DUSP28Q4G0W2 176 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 RPUSD2Q8IZ73 545 aaKnown RBP12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 WDR11Q9BZH6 1224 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 TRPV6Q9H1D0 765 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 NKX2-4Q9H2Z4 354 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 POLR3EQ9NVU0 708 aa12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 CXXC1Q9P0U4 656 aaPredicted RBP12.44□□□□□ -0.42
CHMP2A-202ENST00000596708 A0A0D9SFI3 127 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 NFIBO00712 420 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 MYL3P08590 195 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 FGRP09769 529 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 HSPD1P10809 573 aaKnown RBP12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 IGFBP4P22692 258 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 HAND2P61296 217 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 RNF207Q6ZRF8 634 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 OR6J1Q8NGC5 347 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 MORC4Q8TE76 937 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 SCLYQ96I15 445 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 NOC4LQ9BVI4 516 aaKnown RBP12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 SLC28A3Q9HAS3 691 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 TCP11L1Q9NUJ3 509 aa12.43□□□□□ -0.42
CHMP2A-202ENST00000596708 EYSQ5T1H1 3165 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 LOC102724159A0A0B4J2E5 919 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 SUPT20HL2P0C7V6 817 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 PDHBP11177 359 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 CPT1AP50416 773 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 RRP1P56182 461 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 PDE4DQ08499 809 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 PWP2Q15269 919 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 CCDC85BQ15834 202 aaPredicted RBP12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 BRDTQ58F21 947 aaPredicted RBP12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 FAM47CQ5HY64 1035 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 TJAP1Q5JTD0 557 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 SLC30A10Q6XR72 485 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 RILPL2Q969X0 211 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 MPHOSPH6Q99547 160 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
CHMP2A-202ENST00000596708 CYP2C9P11712 490 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 RABGGTBP53611 331 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 PURAQ00577 322 aaKnown RBP12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 AKNAD1Q5T1N1 836 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 DEFB128Q7Z7B8 93 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 ZNF589Q86UQ0 364 aaPredicted RBP12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 CLEC4DQ8WXI8 215 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 TTC14Q96N46 770 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 WNT8AQ9H1J5 351 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 TRMT13Q9NUP7 481 aaKnown RBP12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 LAMA4Q16363 1823 aa12.41□□□□□ -0.42
CHMP2A-202ENST00000596708 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 TNKSO95271 1327 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 CCDC171Q6TFL3 1326 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 RAD50Q92878 1312 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 TANC1Q9C0D5 1861 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 RBM47A0AV96 593 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 B4DLN1 442 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 NKRFO15226 690 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 MRPL12P52815 198 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 RPS6P62753 249 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 ADGRE1Q14246 886 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 PPP2R5BQ15173 497 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 USH1GQ495M9 461 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 LNPKQ9C0E8 428 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 YBX2Q9Y2T7 364 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 PRUNE2Q8WUY3 3088 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 KAT6AQ92794 2004 aa12.4□□□□□ -0.42
CHMP2A-202ENST00000596708 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 ZMYM6O95789 1325 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 GOLGA8HP0CJ92 632 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 TXNP10599 105 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 MFAP1P55081 439 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 HDAC1Q13547 482 aaPredicted RBP12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 NBPF20Q3BBV1 942 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 TICAM2Q86XR7 235 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 DNERQ8NFT8 737 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 SCFD2Q8WU76 684 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 PPP1R13LQ8WUF5 828 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 ESR2Q92731 530 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 COPS5Q92905 334 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 UBA5Q9GZZ9 404 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms