RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MYL10Q9BUA6 226 aa21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 UPF3AQ9H1J1 476 aaKnown RBP21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 ZMYND8Q9ULU4 1186 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-202ENST00000593764 OPLAHO14841 1288 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 CTAGE5O15320 804 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 GJA9P57773 515 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 TNFAIP2Q03169 654 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 ADCK5Q3MIX3 580 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 HABP4Q5JVS0 413 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 DNERQ8NFT8 737 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 TSEN34Q9BSV6 310 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 AMNQ9BXJ7 453 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 LRRC2Q9BYS8 371 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 GNEQ9Y223 722 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 MRPL11Q9Y3B7 192 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 MYH6P13533 1939 aa21.5■■□□□ 1.03
SHKBP1-202ENST00000593764 DDAH1O94760 285 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 SYN1P17600 705 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 PTGS1P23219 599 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 EDNRBP24530 442 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 CST5P28325 142 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 RTP1P59025 263 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 NKX3-2P78367 333 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 EXOSC10Q01780 885 aaKnown RBP21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 SNX17Q15036 470 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 KCNA10Q16322 511 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 TMEM63BQ5T3F8 832 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 IQSEC1Q6DN90 963 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 SYTL5Q8TDW5 730 aaPredicted RBP21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 NUP133Q8WUM0 1156 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 KCNB2Q92953 911 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 NEK1Q96PY6 1258 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 PIGSQ96S52 555 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 VTA1Q9NP79 307 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 COL20A1Q9P218 1284 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 TRIOBPQ9H2D6 2365 aa21.49■■□□□ 1.03
SHKBP1-202ENST00000593764 SMPD1P17405 629 aa21.48■■□□□ 1.03
SHKBP1-202ENST00000593764 C1orf53Q5VUE5 145 aa21.48■■□□□ 1.03
SHKBP1-202ENST00000593764 MCF2L2Q86YR7 1114 aa21.48■■□□□ 1.03
SHKBP1-202ENST00000593764 PCDH10Q9P2E7 1040 aa21.48■■□□□ 1.03
SHKBP1-202ENST00000593764 RBM27Q9P2N5 1060 aaKnown RBP21.48■■□□□ 1.03
SHKBP1-202ENST00000593764 PCDHA1Q9Y5I3 950 aa21.48■■□□□ 1.03
SHKBP1-202ENST00000593764 LRRC37A2A6NM11 1700 aa21.48■■□□□ 1.03
SHKBP1-202ENST00000593764 A0A1W2PQ45 241 aaPredicted RBP21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 A0A1W2PQY0 241 aa21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 C6orf222P0C671 652 aaPredicted RBP21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 ACLYP53396 1101 aa21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 GHRHRQ02643 423 aa21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 NFXL1Q6ZNB6 911 aa21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 SGMS1Q86VZ5 419 aa21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 HOMER1Q86YM7 354 aa21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 TAAR1Q96RJ0 339 aa21.47■■□□□ 1.03
SHKBP1-202ENST00000593764 PNMA6FA0A0J9YX94 578 aa21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 RBM47A0AV96 593 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 CCDC69A6NI79 296 aa21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 DHX32Q7L7V1 743 aaKnown RBP21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 CTCFLQ8NI51 663 aaPredicted RBP21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 GDF15Q99988 308 aa21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 SPZ1Q9BXG8 430 aa21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 SPC25Q9HBM1 224 aa21.46■■□□□ 1.03
SHKBP1-202ENST00000593764 MOXD2PA6NHM9 499 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 RXRAP19793 462 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 SMARCA1P28370 1054 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 KIF5BP33176 963 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 HSPA4P34932 840 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 HSD17B4P51659 736 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 PDE4DQ08499 809 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 TRIM60Q495X7 471 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 GNASQ5JWF2 1037 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 SRBD1Q8N5C6 995 aaKnown RBP21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 TCEANC2Q96MN5 208 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 ATP11BQ9Y2G3 1177 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 Q9Y3F1 56 aa21.45■■□□□ 1.02
SHKBP1-202ENST00000593764 LAMA3Q16787 3333 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 DYNC1LI2O43237 492 aaPredicted RBP21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 PLEKHA8P1O95397 391 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 CFBP00751 764 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 ASGR1P07306 291 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 BEX3Q00994 111 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 KRT32Q14532 448 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 DUSP28Q4G0W2 176 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 TLK2Q86UE8 772 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 RAB11FIP4Q86YS3 637 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 PCSK9Q8NBP7 692 aaKnown RBP21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 PIBF1Q8WXW3 757 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 WDR11Q9BZH6 1224 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 SLC12A7Q9Y666 1083 aa21.44■■□□□ 1.02
SHKBP1-202ENST00000593764 CALM1P0DP23 149 aa21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 CALM2P0DP24 149 aa21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 CALM3P0DP25 149 aa21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 MAGEA10P43363 369 aaPredicted RBP21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 FANCBQ8NB91 859 aa21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 NSUN6Q8TEA1 469 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 RMDN3Q96TC7 470 aa21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 MPHOSPH6Q99547 160 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 LZTS2Q9BRK4 669 aa21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 MAP3K20Q9NYL2 800 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 SNX14Q9Y5W7 946 aa21.43■■□□□ 1.02
SHKBP1-202ENST00000593764 B4DLN1 442 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms