RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 PFDN6O15212 129 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 NPM3O75607 178 aaKnown RBP6.99□□□□□ -1.29
SMAD4-212ENST00000591126 ECM2O94769 699 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-212ENST00000591126 LIFRP42702 1097 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 RASGRF1Q13972 1273 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 POLA2Q14181 598 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 PTPROQ16827 1216 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 PROSER3Q2NL68 480 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 NDUFAF2Q8N183 169 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 TMEM199Q8N511 208 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 FSIP1Q8NA03 581 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 RNF34Q969K3 372 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 ANKRD36BP1Q96IX9 119 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 DDX50Q9BQ39 737 aaKnown RBP6.99□□□□□ -1.29
SMAD4-212ENST00000591126 NUCKS1Q9H1E3 243 aaKnown RBP6.99□□□□□ -1.29
SMAD4-212ENST00000591126 VCPKMTQ9H867 229 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 ADGRB1O14514 1584 aa6.99□□□□□ -1.29
SMAD4-212ENST00000591126 MYPNQ86TC9 1320 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SPDYE2BA6NHP3 402 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 GOLGA8CPA6NN73 597 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 WDR64B1ANS9 1081 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SPDYE6P0CI01 402 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 BPIFB4P59827 614 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 ZNF569Q5MCW4 686 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 HAUS6Q7Z4H7 955 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 KIAA1328Q86T90 577 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 NLRP7Q8WX94 980 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 MRPS27Q92552 414 aaKnown RBP6.98□□□□□ -1.29
SMAD4-212ENST00000591126 FAM20AQ96MK3 541 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 EDEM3Q9BZQ6 932 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 METTL14Q9HCE5 456 aaKnown RBP6.98□□□□□ -1.29
SMAD4-212ENST00000591126 RWDD3Q9Y3V2 267 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 PXDNQ92626 1479 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 ZMYM6O95789 1325 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 CCDC85CA6NKD9 419 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 ZBTB5O15062 677 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SPTLC2O15270 562 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 CUTAO60888 179 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 MCM7P33993 719 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 USP8P40818 1118 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 CREMQ03060 361 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 DGKDQ16760 1214 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 CFAP58Q5T655 872 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 PDXDC2PQ6P474 469 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 PDXDC1Q6P996 788 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 NECAB2Q7Z6G3 386 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 PLEKHM2Q8IWE5 1019 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 CSRNP2Q9H175 543 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 DDX25Q9UHL0 483 aaKnown RBP6.98□□□□□ -1.29
SMAD4-212ENST00000591126 LCMT1Q9UIC8 334 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 PALD1Q9ULE6 856 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 FLT1P17948 1338 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SLIT2O94813 1529 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SLC27A2O14975 620 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 BCRP11274 1271 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 IL1R1P14778 569 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 RNF169Q8NCN4 708 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 AKT1S1Q96B36 256 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 CDCA5Q96FF9 252 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 RMDN3Q96TC7 470 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 ZMYM2Q9UBW7 1377 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 GPR75-ASB3A0A0A6YYF3 556 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 CHMP2AO43633 222 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 PRDM1O75626 825 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 VIL1P09327 827 aaKnown RBP6.98□□□□□ -1.29
SMAD4-212ENST00000591126 MCM3P25205 808 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SLC26A2P50443 739 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SPDYE2Q495Y8 402 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 MSL3Q8N5Y2 521 aaKnown RBP6.98□□□□□ -1.29
SMAD4-212ENST00000591126 RGS22Q8NE09 1264 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 UBN1Q9NPG3 1134 aa6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMAD4-212ENST00000591126 SLC15A5A6NIM6 579 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 NBPF26B4DH59 902 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 STK25O00506 426 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 DDNO94850 711 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 TMEM191BP0C7N4 346 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 CTDSPL2Q05D32 466 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 STX1AQ16623 288 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 MYCT1Q8N699 235 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 UBE2Q2Q8WVN8 375 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 EAF2Q96CJ1 260 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 CGNQ9P2M7 1197 aaKnown RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 ZSCAN12O43309 604 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 TM4SF1P30408 202 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 AP3M2P53677 418 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 HMGCS2P54868 508 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 SEMA3FQ13275 785 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 CATSPER4Q7RTX7 472 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 MAP3K14Q99558 947 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 ZSWIM4Q9H7M6 989 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 EVA1BQ9NVM1 165 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 PKD2L1Q9P0L9 805 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 SYNGAP1Q96PV0 1343 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 E7EWF7 191 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 AKR1A1P14550 325 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 EFNA5P52803 228 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 MNS1Q8NEH6 495 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms