RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	PDGFC	Q9NRA1	345 aa		20.12	■□□□□ 0.81
MBD1-221	ENST00000589867	MYADML2	A6NDP7	307 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	CCDC69	A6NI79	296 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	ASB14	A6NK59	587 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	CTAGE5	O15320	804 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	PGK1	P00558	417 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	NFXL1	Q6ZNB6	911 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	HOMER1	Q86YM7	354 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	JAKMIP1	Q96N16	626 aa	Known RBP	20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	FAM217B	Q9NTX9	383 aa	Predicted RBP	20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	FAM184B	Q9ULE4	1060 aa		20.11	■□□□□ 0.81
MBD1-221	ENST00000589867	PNMA6F	A0A0J9YX94	578 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	RARB	P10826	455 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	SMARCA1	P28370	1054 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	LRRC26	Q2I0M4	334 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	CCSAP	Q6IQ19	270 aa	Predicted RBP	20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	FBXO16	Q8IX29	292 aa	Predicted RBP	20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	KLHDC9	Q8NEP7	349 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	TAAR1	Q96RJ0	339 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	HTATIP2	Q9BUP3	242 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	MAF1	Q9H063	256 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	XPNPEP3	Q9NQH7	507 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	MRPL11	Q9Y3B7	192 aa	Known RBP	20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	SLC12A7	Q9Y666	1083 aa		20.1	■□□□□ 0.81
MBD1-221	ENST00000589867	SYNRG	Q9UMZ2	1314 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867		H0YGN5	161 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	DUSP11	O75319	330 aa	Known RBP	20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	ADCYAP1R1	P41586	468 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	HSD17B4	P51659	736 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	FUT2	Q10981	343 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	TMTC3	Q6ZXV5	915 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	EEPD1	Q7L9B9	569 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	FANCB	Q8NB91	859 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	ARRDC4	Q8NCT1	418 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	CTCFL	Q8NI51	663 aa	Predicted RBP	20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	PIBF1	Q8WXW3	757 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	DPF3	Q92784	378 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	AGXT2	Q9BYV1	514 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	UPF3A	Q9H1J1	476 aa	Known RBP	20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	PCDH10	Q9P2E7	1040 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	GNE	Q9Y223	722 aa	Known RBP	20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	PCDHA1	Q9Y5I3	950 aa		20.09	■□□□□ 0.81
MBD1-221	ENST00000589867	LOC102724159	A0A0B4J2E5	919 aa		20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	RPS6KB1	P23443	525 aa		20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	KIF5B	P33176	963 aa		20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	NKX3-2	P78367	333 aa		20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	PWP2	Q15269	919 aa	Known RBP	20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	MICU3	Q86XE3	530 aa		20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	FBXL16	Q8N461	479 aa		20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	DNER	Q8NFT8	737 aa		20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	SENP6	Q9GZR1	1112 aa	Predicted RBP	20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	ADD3	Q9UEY8	706 aa	Known RBP	20.08	■□□□□ 0.81
MBD1-221	ENST00000589867	RBM47	A0AV96	593 aa	Known RBP	20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	HMGB1	P09429	215 aa	Known RBP	20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	CALM1	P0DP23	149 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	CALM2	P0DP24	149 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	CALM3	P0DP25	149 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	SMPD1	P17405	629 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867		Q6ZUG5	572 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	LZTS2	Q9BRK4	669 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	VTA1	Q9NP79	307 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	PHF24	Q9UPV7	400 aa		20.07	■□□□□ 0.8
MBD1-221	ENST00000589867	hCG_1642624	A0A1W2PR95	340 aa		20.06	■□□□□ 0.8
MBD1-221	ENST00000589867	CDC27	P30260	824 aa		20.06	■□□□□ 0.8
MBD1-221	ENST00000589867	GNAQ	P50148	359 aa		20.06	■□□□□ 0.8
MBD1-221	ENST00000589867	GJA9	P57773	515 aa		20.06	■□□□□ 0.8
MBD1-221	ENST00000589867	BLOC1S2	Q6QNY1	142 aa		20.06	■□□□□ 0.8
MBD1-221	ENST00000589867	MCF2L2	Q86YR7	1114 aa		20.06	■□□□□ 0.8
MBD1-221	ENST00000589867	ZSWIM6	Q9HCJ5	1215 aa		20.06	■□□□□ 0.8
MBD1-221	ENST00000589867	CNTNAP5	Q8WYK1	1306 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	KLF18	A0A0U1RQI7	1052 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	SEC24B	O95487	1268 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	CFB	P00751	764 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	CAST	P20810	708 aa	Known RBP	20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	CST5	P28325	142 aa	Predicted RBP	20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	HOXA13	P31271	388 aa	Predicted RBP	20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	TNFAIP2	Q03169	654 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	APOBR	Q0VD83	1088 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	CCDC82	Q8N4S0	544 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	KIAA1217	Q5T5P2	1943 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	TRIOBP	Q9H2D6	2365 aa		20.05	■□□□□ 0.8
MBD1-221	ENST00000589867	ZBTB43	O43298	467 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	EVI5	O60447	810 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	MYCN	P04198	464 aa	Predicted RBP	20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	ATN1	P54259	1190 aa	Predicted RBP	20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	SNX17	Q15036	470 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	IQSEC1	Q6DN90	963 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	BRF1	Q92994	677 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	FERMT2	Q96AC1	680 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	RRP36	Q96EU6	259 aa	Known RBP	20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	RMDN3	Q96TC7	470 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	PXMP2	Q9NR77	195 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	NID2	Q14112	1375 aa		20.04	■□□□□ 0.8
MBD1-221	ENST00000589867	KBTBD13	C9JR72	458 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	ARIH2	O95376	493 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	RCAN1	P53805	252 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	EVC	P57679	992 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	TOB2	Q14106	344 aa	Predicted RBP	20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	KCNA10	Q16322	511 aa		20.03	■□□□□ 0.8
MBD1-221	ENST00000589867	RTN1	Q16799	776 aa		20.03	■□□□□ 0.8

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