RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 KCNJ6P48051 423 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 KARSQ15046 597 aaKnown RBP11.7□□□□□ -0.54
VPS25-203ENST00000589520 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 RASGRP2Q7LDG7 609 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 SLFN12Q8IYM2 578 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 CCDC112Q8NEF3 446 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 NOC3LQ8WTT2 800 aaKnown RBP11.7□□□□□ -0.54
VPS25-203ENST00000589520 MBOAT7Q96N66 472 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 C7orf25Q9BPX7 421 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 NT5C3AQ9H0P0 336 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 HSD3B7Q9H2F3 369 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 KCNF1Q9H3M0 494 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 MYOZ2Q9NPC6 264 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 ZBTB21Q9ULJ3 1066 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 NFE2L3Q9Y4A8 694 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 PCNTO95613 3336 aa11.7□□□□□ -0.54
VPS25-203ENST00000589520 CNTNAP1P78357 1384 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 PVALEFA0A1B0GWK0 134 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 CLRN2A0PK11 232 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 H7C1D1 291 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 PIK3CDO00329 1044 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
VPS25-203ENST00000589520 RHOBTB3O94955 611 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 CAP2P40123 477 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 TECP42680 631 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 STAT2P52630 851 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 CUL4BQ13620 913 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 COBLL1Q53SF7 1204 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 NAALADL2Q58DX5 795 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 CNNM4Q6P4Q7 775 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 SV2BQ7L1I2 683 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 VSTM4Q8IW00 320 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 GRAMD1CQ8IYS0 662 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 SAMD3Q8N6K7 520 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 DHTKD1Q96HY7 919 aaPredicted RBP11.69□□□□□ -0.54
VPS25-203ENST00000589520 CDK5RAP3Q96JB5 506 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 EHMT1Q9H9B1 1298 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 VEZTQ9HBM0 779 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
VPS25-203ENST00000589520 FEM1BQ9UK73 627 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
VPS25-203ENST00000589520 RABGAP1Q9Y3P9 1069 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
VPS25-203ENST00000589520 WDR90Q96KV7 1748 aa11.69□□□□□ -0.54
VPS25-203ENST00000589520 KDM3AQ9Y4C1 1321 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 SPDYE3A6NKU9 549 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 WNT10BO00744 389 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 RAD21O60216 631 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 SFPQP23246 707 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS25-203ENST00000589520 TXKP42681 527 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
VPS25-203ENST00000589520 PAK1Q13153 545 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 TPD52L1Q16890 204 aaPredicted RBP11.68□□□□□ -0.54
VPS25-203ENST00000589520 Q4G0T1 1027 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 TMC6Q7Z403 805 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 CACTINQ8WUQ7 758 aaKnown RBP11.68□□□□□ -0.54
VPS25-203ENST00000589520 PRIMPOLQ96LW4 560 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 ANO3Q9BYT9 981 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 PGAP2Q9UHJ9 254 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 PCDHA12Q9UN75 941 aa11.68□□□□□ -0.54
VPS25-203ENST00000589520 MRPL11Q9Y3B7 192 aaKnown RBP11.68□□□□□ -0.54
VPS25-203ENST00000589520 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 BICDL2A1A5D9 508 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
VPS25-203ENST00000589520 FZD9O00144 591 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 MEIS2O14770 477 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 PSMA7O14818 248 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 CYP3A4P08684 503 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 FDX1P10109 184 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 SKILP12757 684 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 CIITAP33076 1130 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS25-203ENST00000589520 PSMD2Q13200 908 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 NR1I3Q14994 352 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 DNTTIP2Q5QJE6 756 aaKnown RBP11.67□□□□□ -0.54
VPS25-203ENST00000589520 HYIQ5T013 277 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 FOXR2Q6PJQ5 311 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 GIMAP8Q8ND71 665 aaPredicted RBP11.67□□□□□ -0.54
VPS25-203ENST00000589520 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
VPS25-203ENST00000589520 LPAR1Q92633 364 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 FAM20AQ96MK3 541 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 MTRQ99707 1265 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
VPS25-203ENST00000589520 MAP3K20Q9NYL2 800 aaKnown RBP11.67□□□□□ -0.54
VPS25-203ENST00000589520 PRR12Q9ULL5 1215 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 SIPA1L1O43166 1804 aa11.67□□□□□ -0.54
VPS25-203ENST00000589520 ABCB11O95342 1321 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 A0A1B0GTH6 734 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 A0A1W2PRG0 241 aa11.66□□□□□ -0.54
VPS25-203ENST00000589520 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
VPS25-203ENST00000589520 TPM2P07951 284 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms