RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 WDR78Q5VTH9 848 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 DIS3L2Q8IYB7 885 aaKnown RBP19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 MMP19Q99542 508 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 PORCNQ9H237 461 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 ZSCAN16Q9H4T2 348 aaPredicted RBP19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 ZNF236Q9UL36 1845 aa19.43■□□□□ 0.7
SCAMP4-211ENST00000588907 MEIS2O14770 477 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 DTNBO60941 627 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 TBC1D8O95759 1140 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 DDIT3P35638 169 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 CLK2P49760 499 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 FOSBP53539 338 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 FCGRTP55899 365 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 GUCY1B3Q02153 619 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 NSMFQ6X4W1 530 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 KRT25Q7Z3Z0 450 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 BRAPQ7Z569 592 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 PLEKHH3Q7Z736 793 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 SOCS4Q8WXH5 440 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 SHISA4Q96DD7 197 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 MPHOSPH6Q99547 160 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 EFCC1Q9HA90 598 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 A1CFQ9NQ94 594 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 SLC5A4Q9NY91 659 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 CYP39A1Q9NYL5 469 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 MTMR6Q9Y217 621 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 SMCHD1A6NHR9 2005 aa19.42■□□□□ 0.7
SCAMP4-211ENST00000588907 LOC102724159A0A0B4J2E5 919 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 SLC15A5A6NIM6 579 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 B4DLN1 442 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 GNRH1P01148 92 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 U2AF2P26368 475 aaKnown RBP eCLIP19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 RPS6P62753 249 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 LACTBP83111 547 aaPredicted RBP19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 PWP2Q15269 919 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 NPY5RQ15761 445 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 MCTP1Q6DN14 999 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 GPR142Q7Z601 462 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 DNERQ8NFT8 737 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 GJB4Q9NTQ9 266 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 WBP1LQ9NX94 342 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 ADD3Q9UEY8 706 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 ATP6V1DQ9Y5K8 247 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 PLXNB2O15031 1838 aa19.41■□□□□ 0.7
SCAMP4-211ENST00000588907 CCDC194A0A1B0GVG4 234 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 M0R2N6 131 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 GPR25O00155 361 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 TNPO2O14787 897 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 PEX10O60683 326 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 ZSCAN22P10073 491 aaPredicted RBP19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 TAL1P17542 331 aaPredicted RBP19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 PTPREP23469 700 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 GRB14Q14449 540 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 NOSTRINQ8IVI9 506 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 JMYQ8N9B5 988 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 ERO1AQ96HE7 468 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 PCDHA6Q9UN73 950 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 PCDHA8Q9Y5H6 950 aa19.4■□□□□ 0.7
SCAMP4-211ENST00000588907 BTBD18B2RXH4 712 aa19.39■□□□□ 0.69
SCAMP4-211ENST00000588907 POTEB2H3BUK9 544 aa19.39■□□□□ 0.69
SCAMP4-211ENST00000588907 BAATQ14032 418 aaPredicted RBP19.39■□□□□ 0.69
SCAMP4-211ENST00000588907 NONOQ15233 471 aaKnown RBP eCLIP19.39■□□□□ 0.692e-6■■■□□ 19.1
SCAMP4-211ENST00000588907 USP17L6PQ6QN14 398 aa19.39■□□□□ 0.69
SCAMP4-211ENST00000588907 SYTL5Q8TDW5 730 aaPredicted RBP19.39■□□□□ 0.69
SCAMP4-211ENST00000588907 CHMP5Q9NZZ3 219 aa19.39■□□□□ 0.69
SCAMP4-211ENST00000588907 PCNTO95613 3336 aa19.39■□□□□ 0.69
SCAMP4-211ENST00000588907 CEP350Q5VT06 3117 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 MGAMO43451 1857 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 FKTNO75072 461 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 BRD1O95696 1058 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 HOXD10P28358 340 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 HOXA13P31271 388 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 TRAPPC10P48553 1259 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 UBE2SQ16763 222 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 SLC30A10Q6XR72 485 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 NSUN6Q8TEA1 469 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 TNFRSF25Q93038 417 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 NAP1L4Q99733 375 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 R3HDMLQ9H3Y0 253 aa19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 BIN2Q9UBW5 565 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 NOL7Q9UMY1 257 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 DIS3Q9Y2L1 958 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-211ENST00000588907 FRMPD4Q14CM0 1322 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 DNAJC25-GNG10A0A024R161 153 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 ADORA2AP29274 412 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 XRRA1Q6P2D8 792 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 ZNF467Q7Z7K2 595 aaPredicted RBP19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 FCHSD1Q86WN1 690 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 FAM133AQ8N9E0 248 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 OXER1Q8TDS5 423 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 IWS1Q96ST2 819 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 NUDT12Q9BQG2 462 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 ANO3Q9BYT9 981 aa19.37■□□□□ 0.69
SCAMP4-211ENST00000588907 F13A1P00488 732 aa19.36■□□□□ 0.69
SCAMP4-211ENST00000588907 SREBF1P36956 1147 aa19.36■□□□□ 0.69
SCAMP4-211ENST00000588907 RGS2P41220 211 aa19.36■□□□□ 0.69
SCAMP4-211ENST00000588907 PSMC4P43686 418 aa19.36■□□□□ 0.69
SCAMP4-211ENST00000588907 NR5A1Q13285 461 aa19.36■□□□□ 0.69
SCAMP4-211ENST00000588907 RILPL1Q5EBL4 403 aa19.36■□□□□ 0.69
SCAMP4-211ENST00000588907 MORN1Q5T089 497 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms