RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 GOLGA5Q8TBA6 731 aa17.03■□□□□ 0.32
SAFB-205ENST00000588852 CCSER1Q9C0I3 900 aa17.03■□□□□ 0.32
SAFB-205ENST00000588852 RABEP2Q9H5N1 569 aa17.03■□□□□ 0.32
SAFB-205ENST00000588852 ANKIB1Q9P2G1 1089 aa17.03■□□□□ 0.32
SAFB-205ENST00000588852 SLC7A5Q01650 507 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 LRRC41Q15345 812 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 CLEC4GQ6UXB4 293 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 MYH10P35580 1976 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 KRT86O43790 486 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 CCDC96Q2M329 555 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 TBCKQ8TEA7 893 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 KANSL2Q9H9L4 492 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 SCN7AQ01118 1682 aa17.02■□□□□ 0.32
SAFB-205ENST00000588852 MYO1CO00159 1063 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 MOCS3O95396 460 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.31
SAFB-205ENST00000588852 RASA1P20936 1047 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 CCNE1P24864 410 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 PIGSQ96S52 555 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 NUDT12Q9BQG2 462 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 ARHGAP20Q9P2F6 1191 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 SALL4Q9UJQ4 1053 aa17.02■□□□□ 0.31
SAFB-205ENST00000588852 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
SAFB-205ENST00000588852 NCK2O43639 380 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 ZPR1O75312 459 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 OR52Z1P0C646 297 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 GGCXP38435 758 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 KRT83P78385 493 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 SETDB2Q96T68 719 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
SAFB-205ENST00000588852 PSD3Q9NYI0 1048 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 HPCAL4Q9UM19 191 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 FRMPD2Q68DX3 1309 aaPredicted RBP17.01■□□□□ 0.31
SAFB-205ENST00000588852 DNA2P51530 1060 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
SAFB-205ENST00000588852 APBA1Q02410 837 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 CCDC42Q96M95 316 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
SAFB-205ENST00000588852 ZC3H4Q9UPT8 1303 aaKnown RBP17■□□□□ 0.31
SAFB-205ENST00000588852 POTEMA6NI47 508 aa17■□□□□ 0.31
SAFB-205ENST00000588852 TM4SF1P30408 202 aa17■□□□□ 0.31
SAFB-205ENST00000588852 ZBED6P86452 979 aa17■□□□□ 0.31
SAFB-205ENST00000588852 LRRC31Q6UY01 552 aa17■□□□□ 0.31
SAFB-205ENST00000588852 LEKR1Q6ZMV7 388 aa17■□□□□ 0.31
SAFB-205ENST00000588852 TMC4Q7Z404 712 aa17■□□□□ 0.31
SAFB-205ENST00000588852 COA7Q96BR5 231 aa17■□□□□ 0.31
SAFB-205ENST00000588852 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
SAFB-205ENST00000588852 DHTKD1Q96HY7 919 aaPredicted RBP17■□□□□ 0.31
SAFB-205ENST00000588852 DMGDHQ9UI17 866 aaKnown RBP17■□□□□ 0.31
SAFB-205ENST00000588852 KIAA1551Q9HCM1 1747 aa17■□□□□ 0.31
SAFB-205ENST00000588852 CYLC1P35663 651 aaPredicted RBP17■□□□□ 0.31
SAFB-205ENST00000588852 NFRKBQ6P4R8 1299 aa17■□□□□ 0.31
SAFB-205ENST00000588852 LRRC1Q9BTT6 524 aa17■□□□□ 0.31
SAFB-205ENST00000588852 RSPH14Q9UHP6 348 aa17■□□□□ 0.31
SAFB-205ENST00000588852 MYMKA6NI61 221 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 FAM71BQ8TC56 605 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 EHD4Q9H223 541 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 EIF3CLB5ME19 914 aaKnown RBP16.99■□□□□ 0.31
SAFB-205ENST00000588852 AGPSO00116 658 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 SLC37A4O43826 429 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 IPO7O95373 1038 aaKnown RBP16.99■□□□□ 0.31
SAFB-205ENST00000588852 TDP2O95551 362 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
SAFB-205ENST00000588852 EIF3CQ99613 913 aaKnown RBP16.99■□□□□ 0.31
SAFB-205ENST00000588852 SELENOOQ9BVL4 669 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 ZMYND12Q9H0C1 365 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 POLD4Q9HCU8 107 aa16.99■□□□□ 0.31
SAFB-205ENST00000588852 RRP15Q9Y3B9 282 aaKnown RBP16.99■□□□□ 0.31
SAFB-205ENST00000588852 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 PRPF6O94906 941 aaKnown RBP16.98■□□□□ 0.31
SAFB-205ENST00000588852 EIF4A3P38919 411 aaKnown RBP16.98■□□□□ 0.31
SAFB-205ENST00000588852 NONOQ15233 471 aaKnown RBP eCLIP16.98■□□□□ 0.31
SAFB-205ENST00000588852 TTC19Q6DKK2 380 aaPredicted RBP16.98■□□□□ 0.31
SAFB-205ENST00000588852 TMED8Q6PL24 325 aaPredicted RBP16.98■□□□□ 0.31
SAFB-205ENST00000588852 CREG2Q8IUH2 290 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 BLOC1S4Q9NUP1 217 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 BUB1O43683 1085 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 GRB10Q13322 594 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 RRAGAQ7L523 313 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 SRLQ86TD4 932 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 EYA3Q99504 573 aa16.98■□□□□ 0.31
SAFB-205ENST00000588852 IFIH1Q9BYX4 1025 aaKnown RBP16.98■□□□□ 0.31
SAFB-205ENST00000588852 EDIL3O43854 480 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
SAFB-205ENST00000588852 CCNI2Q6ZMN8 369 aaPredicted RBP16.97■□□□□ 0.31
SAFB-205ENST00000588852 NEK8Q86SG6 692 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 TBC1D7Q9P0N9 293 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 PCDHA13Q9Y5I0 950 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 LRRC53A6NM62 1247 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms