RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 CYTH3O43739 400 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 C6orf222P0C671 652 aaPredicted RBP16.83■□□□□ 0.28
CACTIN-206ENST00000588749 SYN1P17600 705 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 RTP1P59025 263 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
CACTIN-206ENST00000588749 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
CACTIN-206ENST00000588749 MCF2L2Q86YR7 1114 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 TMTC2Q8N394 836 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 NEK1Q96PY6 1258 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 SPC25Q9HBM1 224 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 PDGFCQ9NRA1 345 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 PCDHA1Q9Y5I3 950 aa16.83■□□□□ 0.28
CACTIN-206ENST00000588749 RXRAP19793 462 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 KIF5BP33176 963 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 LIFRP42702 1097 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 PDE4DQ08499 809 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 KRT32Q14532 448 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 ADCK5Q3MIX3 580 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 TAPT1Q6NXT6 567 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 SLC39A5Q6ZMH5 540 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 RAB11FIP4Q86YS3 637 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 KLHDC9Q8NEP7 349 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 DNERQ8NFT8 737 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 SYTL5Q8TDW5 730 aaPredicted RBP16.82■□□□□ 0.28
CACTIN-206ENST00000588749 PIBF1Q8WXW3 757 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 TCEANC2Q96MN5 208 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 MPHOSPH6Q99547 160 aaKnown RBP16.82■□□□□ 0.28
CACTIN-206ENST00000588749 MAP3K14Q99558 947 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 UPF3AQ9H1J1 476 aaKnown RBP16.82■□□□□ 0.28
CACTIN-206ENST00000588749 PCDH10Q9P2E7 1040 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 ATP11BQ9Y2G3 1177 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
CACTIN-206ENST00000588749 RANBP2P49792 3224 aaKnown RBP16.81■□□□□ 0.28
CACTIN-206ENST00000588749 A0A1W2PQ45 241 aaPredicted RBP16.81■□□□□ 0.28
CACTIN-206ENST00000588749 A0A1W2PQY0 241 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 OPLAHO14841 1288 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 REC8O95072 547 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 CFBP00751 764 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 SMPD1P17405 629 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 PTGS1P23219 599 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 CST5P28325 142 aaPredicted RBP16.81■□□□□ 0.28
CACTIN-206ENST00000588749 ACLYP53396 1101 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 GJA9P57773 515 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 KCNA10Q16322 511 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 TRIM60Q495X7 471 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 HABP4Q5JVS0 413 aaKnown RBP16.81■□□□□ 0.28
CACTIN-206ENST00000588749 TLK2Q86UE8 772 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 TSEN34Q9BSV6 310 aaKnown RBP16.81■□□□□ 0.28
CACTIN-206ENST00000588749 MAF1Q9H063 256 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 COL20A1Q9P218 1284 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
CACTIN-206ENST00000588749 PNMA6FA0A0J9YX94 578 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 MOXD2PA6NHM9 499 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 B4DLN1 442 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 PLEKHA8P1O95397 391 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 CALM1P0DP23 149 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 CALM2P0DP24 149 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 CALM3P0DP25 149 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 EDNRBP24530 442 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
CACTIN-206ENST00000588749 SNX17Q15036 470 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 GNASQ5JWF2 1037 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 TMEM63BQ5T3F8 832 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 IQSEC1Q6DN90 963 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 CCSAPQ6IQ19 270 aaPredicted RBP16.8■□□□□ 0.28
CACTIN-206ENST00000588749 DHX32Q7L7V1 743 aaKnown RBP16.8■□□□□ 0.28
CACTIN-206ENST00000588749 MICU3Q86XE3 530 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 PCSK9Q8NBP7 692 aaKnown RBP16.8■□□□□ 0.28
CACTIN-206ENST00000588749 TAAR1Q96RJ0 339 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 AP5M1Q9H0R1 490 aa16.8■□□□□ 0.28
CACTIN-206ENST00000588749 RBM27Q9P2N5 1060 aaKnown RBP16.8■□□□□ 0.28
CACTIN-206ENST00000588749 GNEQ9Y223 722 aaKnown RBP16.8■□□□□ 0.28
CACTIN-206ENST00000588749 CTAGE5O15320 804 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 HSPA4P34932 840 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 GNAQP50148 359 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 BEX3Q00994 111 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 TRAF1Q13077 416 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 SGMS1Q86VZ5 419 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
CACTIN-206ENST00000588749 RMDN3Q96TC7 470 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 LZTS2Q9BRK4 669 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 WDR11Q9BZH6 1224 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 STARD7Q9NQZ5 370 aa16.79■□□□□ 0.28
CACTIN-206ENST00000588749 DYNC1LI2O43237 492 aaPredicted RBP16.78■□□□□ 0.28
CACTIN-206ENST00000588749 ASGR1P07306 291 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
CACTIN-206ENST00000588749 HSD17B4P51659 736 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 EXOSC10Q01780 885 aaKnown RBP16.78■□□□□ 0.28
CACTIN-206ENST00000588749 DUSP28Q4G0W2 176 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 APOA5Q6Q788 366 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 SYNE3Q6ZMZ3 975 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 CMTR1Q8N1G2 835 aaKnown RBP16.78■□□□□ 0.28
CACTIN-206ENST00000588749 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
CACTIN-206ENST00000588749 KCNB2Q92953 911 aa16.78■□□□□ 0.28
CACTIN-206ENST00000588749 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
CACTIN-206ENST00000588749 GLT1D1Q96MS3 346 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms