RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 RAVER2Q9HCJ3 691 aaKnown RBP12.02□□□□□ -0.48
NEDD4L-224ENST00000588712 FBXO40Q9UH90 709 aa12.02□□□□□ -0.48
NEDD4L-224ENST00000588712 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.48
NEDD4L-224ENST00000588712 PASKQ96RG2 1323 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 LETM1O95202 739 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 PTPREP23469 700 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 STAT3P40763 770 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 PRPHP41219 470 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 ATP2C1P98194 919 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 PTGDRQ13258 359 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 LETM2Q2VYF4 491 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 TREML2Q5T2D2 321 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 USP17L6PQ6QN14 398 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 CCDC73Q6ZRK6 1079 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 CHST13Q8NET6 341 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 ANO3Q9BYT9 981 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 TMEM260Q9NX78 707 aa12.02□□□□□ -0.49
NEDD4L-224ENST00000588712 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 CCNT1O60563 726 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 GADD45BO75293 160 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 TOMM70O94826 608 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 MCM7P33993 719 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 HSD17B4P51659 736 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 INHBEP58166 350 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 FMR1Q06787 632 aaKnown RBP eCLIP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 UBE2SQ16763 222 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 SNRNP48Q6IEG0 339 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 ANKRD23Q86SG2 305 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 MRPS27Q92552 414 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 PGBD1Q96JS3 809 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 PYM1Q9BRP8 204 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 ASCC2Q9H1I8 757 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 FAM13BQ9NYF5 915 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 ZNF214Q9UL59 606 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 PARP14Q460N5 1801 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 KIF3CO14782 793 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 OPLAHO14841 1288 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 SLC25A27O95847 323 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 CYP3A4P08684 503 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 SREBF1P36956 1147 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 TMEM132BQ14DG7 1078 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 CCAR1Q8IX12 1150 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 GPT2Q8TD30 523 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 HHIPL1Q96JK4 782 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 P2RX7Q99572 595 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 ACAD9Q9H845 621 aa12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 ZCCHC17Q9NP64 241 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-224ENST00000588712 CYP3A7-CYP3A51PA0A087WV96 503 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 MANSC4A6NHS7 340 aaPredicted RBP12□□□□□ -0.49
NEDD4L-224ENST00000588712 NEMFO60524 1076 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 CYP3A7P24462 503 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 MARCKSP29966 332 aaPredicted RBP12□□□□□ -0.49
NEDD4L-224ENST00000588712 ZNF157P51786 506 aaPredicted RBP12□□□□□ -0.49
NEDD4L-224ENST00000588712 HERVK_113P62684 666 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 FSTL1Q12841 308 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 MOGSQ13724 837 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 AXDND1Q5T1B0 1012 aaPredicted RBP12□□□□□ -0.49
NEDD4L-224ENST00000588712 RGMBQ6NW40 437 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 DTHD1Q6ZMT9 781 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 SAPCD2Q86UD0 394 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 CLEC4DQ8WXI8 215 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 CCDC34Q96HJ3 373 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 RAB34Q9BZG1 259 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 RNF146Q9NTX7 359 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 DDX19AQ9NUU7 478 aaKnown RBP12□□□□□ -0.49
NEDD4L-224ENST00000588712 RLFQ13129 1914 aa12□□□□□ -0.49
NEDD4L-224ENST00000588712 CCL15-CCL14A0A0B4J2E2 113 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 ADAMTS3O15072 1205 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 CIITAP33076 1130 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 GJA5P36382 358 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 LONP1P36776 959 aaKnown RBP11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 ARHGAP4P98171 946 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 FAM160A1Q05DH4 1040 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 PLS1Q14651 629 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 CCL15Q16663 113 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 NOM1Q5C9Z4 860 aaKnown RBP11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 GPAT2Q6NUI2 795 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 XRRA1Q6P2D8 792 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 RNF207Q6ZRF8 634 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 FBXO2Q9UK22 296 aaPredicted RBP11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 TBX3O15119 743 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 OR52Z1P0C646 297 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 FCHSD1Q86WN1 690 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 RIOX2Q8IUF8 465 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 AK8Q96MA6 479 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 TLL2Q9Y6L7 1015 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 PFASO15067 1338 aa11.99□□□□□ -0.49
NEDD4L-224ENST00000588712 FAM237AA0A1B0GTK4 181 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 TMEM88BA6NKF7 163 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 B4DLN1 442 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 CTAGE5O15320 804 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 MARCH6O60337 910 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms