RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MYADML2A6NDP7 307 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 GJA9P57773 515 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 IRX5P78411 483 aaPredicted RBP23.74■■□□□ 1.39
SS18-224ENST00000584083 PDE4DQ08499 809 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 GNASQ5JWF2 1037 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 IQSEC1Q6DN90 963 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 HOMER1Q86YM7 354 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 ZNF654Q8IZM8 581 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 TMTC2Q8N394 836 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 TBC1D5Q92609 795 aa23.74■■□□□ 1.39
SS18-224ENST00000584083 UPF3AQ9H1J1 476 aaKnown RBP23.74■■□□□ 1.39
SS18-224ENST00000584083 CCDC69A6NI79 296 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 B4DLN1 442 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 ZBTB5O15062 677 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 CENPBP07199 599 aaPredicted RBP23.73■■□□□ 1.39
SS18-224ENST00000584083 MRPL12P52815 198 aaKnown RBP23.73■■□□□ 1.39
SS18-224ENST00000584083 TRIM60Q495X7 471 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 TAPT1Q6NXT6 567 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 PCSK9Q8NBP7 692 aaKnown RBP23.73■■□□□ 1.39
SS18-224ENST00000584083 DNERQ8NFT8 737 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 MTMR8Q96EF0 704 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 MAF1Q9H063 256 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 AP5M1Q9H0R1 490 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 PRKAG2Q9UGJ0 569 aa23.73■■□□□ 1.39
SS18-224ENST00000584083 MOXD2PA6NHM9 499 aa23.72■■□□□ 1.39
SS18-224ENST00000584083 SH2B2O14492 632 aaPredicted RBP23.72■■□□□ 1.39
SS18-224ENST00000584083 CST5P28325 142 aaPredicted RBP23.72■■□□□ 1.39
SS18-224ENST00000584083 COL9A3Q14050 684 aaPredicted RBP23.72■■□□□ 1.39
SS18-224ENST00000584083 SNX17Q15036 470 aa23.72■■□□□ 1.39
SS18-224ENST00000584083 CTCFLQ8NI51 663 aaPredicted RBP23.72■■□□□ 1.39
SS18-224ENST00000584083 PIGSQ96S52 555 aa23.72■■□□□ 1.39
SS18-224ENST00000584083 MYL10Q9BUA6 226 aa23.72■■□□□ 1.39
SS18-224ENST00000584083 PRO3102Q9H379 93 aa23.72■■□□□ 1.39
SS18-224ENST00000584083 RIOX1Q9H6W3 641 aa23.72■■□□□ 1.39
SS18-224ENST00000584083 PCDHA1Q9Y5I3 950 aa23.72■■□□□ 1.39
SS18-224ENST00000584083 DYNC1LI2O43237 492 aaPredicted RBP23.71■■□□□ 1.39
SS18-224ENST00000584083 DDAH1O94760 285 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 SMPD1P17405 629 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 KIF5BP33176 963 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 MAGEA10P43363 369 aaPredicted RBP23.71■■□□□ 1.39
SS18-224ENST00000584083 TRAF1Q13077 416 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 SLC35G1Q2M3R5 365 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 CCSAPQ6IQ19 270 aaPredicted RBP23.71■■□□□ 1.39
SS18-224ENST00000584083 TLK2Q86UE8 772 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 SYTL5Q8TDW5 730 aaPredicted RBP23.71■■□□□ 1.39
SS18-224ENST00000584083 VTI1AQ96AJ9 217 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 NEK1Q96PY6 1258 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 MAP3K14Q99558 947 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 GDF15Q99988 308 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 LRRC2Q9BYS8 371 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 STARD7Q9NQZ5 370 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 PPP4R2Q9NY27 417 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 PCDH10Q9P2E7 1040 aa23.71■■□□□ 1.39
SS18-224ENST00000584083 GNEQ9Y223 722 aaKnown RBP23.71■■□□□ 1.39
SS18-224ENST00000584083 CYTH3O43739 400 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 PPP1R11O60927 126 aaPredicted RBP23.7■■□□□ 1.38
SS18-224ENST00000584083 CFBP00751 764 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 ASGR1P07306 291 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 BEX3Q00994 111 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 C1orf53Q5VUE5 145 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 PIBF1Q8WXW3 757 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 GLT1D1Q96MS3 346 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 TAAR1Q96RJ0 339 aa23.7■■□□□ 1.38
SS18-224ENST00000584083 LBHD1Q9BQE6 289 aaPredicted RBP23.7■■□□□ 1.38
SS18-224ENST00000584083 PRDM5Q9NQX1 630 aaPredicted RBP23.7■■□□□ 1.38
SS18-224ENST00000584083 LIFRP42702 1097 aa23.69■■□□□ 1.38
SS18-224ENST00000584083 MDM2Q00987 491 aaPredicted RBP23.69■■□□□ 1.38
SS18-224ENST00000584083 TLE2Q04725 743 aa23.69■■□□□ 1.38
SS18-224ENST00000584083 NSUN6Q8TEA1 469 aaKnown RBP23.69■■□□□ 1.38
SS18-224ENST00000584083 WDR11Q9BZH6 1224 aa23.69■■□□□ 1.38
SS18-224ENST00000584083 COL20A1Q9P218 1284 aa23.69■■□□□ 1.38
SS18-224ENST00000584083 PNMA6FA0A0J9YX94 578 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 CALM1P0DP23 149 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 CALM2P0DP24 149 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 CALM3P0DP25 149 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 PTGS1P23219 599 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 EDNRBP24530 442 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 KRT32Q14532 448 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 FSCN1Q16658 493 aaKnown RBP23.68■■□□□ 1.38
SS18-224ENST00000584083 TMEM63BQ5T3F8 832 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 ERICH6BQ5W0A0 696 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 RASEFQ8IZ41 740 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 RMDN3Q96TC7 470 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 Q9Y3F1 56 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 SLC12A7Q9Y666 1083 aa23.68■■□□□ 1.38
SS18-224ENST00000584083 CTAGE5O15320 804 aa23.67■■□□□ 1.38
SS18-224ENST00000584083 PQBP1O60828 265 aaKnown RBP23.67■■□□□ 1.38
SS18-224ENST00000584083 RXRAP19793 462 aa23.67■■□□□ 1.38
SS18-224ENST00000584083 BMP8BP34820 402 aa23.67■■□□□ 1.38
SS18-224ENST00000584083 GNAQP50148 359 aa23.67■■□□□ 1.38
SS18-224ENST00000584083 NKX3-2P78367 333 aa23.67■■□□□ 1.38
SS18-224ENST00000584083 TSGA10IPQ3SY00 556 aa23.67■■□□□ 1.38
SS18-224ENST00000584083 DUSP28Q4G0W2 176 aa23.67■■□□□ 1.38
SS18-224ENST00000584083 UBE2OQ9C0C9 1292 aaKnown RBP23.67■■□□□ 1.38
SS18-224ENST00000584083 ELP1O95163 1332 aa23.66■■□□□ 1.38
SS18-224ENST00000584083 A0A1W2PPC1 479 aa23.66■■□□□ 1.38
SS18-224ENST00000584083 RBM47A0AV96 593 aaKnown RBP23.66■■□□□ 1.38
SS18-224ENST00000584083 OPLAHO14841 1288 aa23.66■■□□□ 1.38
SS18-224ENST00000584083 ZEB2O60315 1214 aa23.66■■□□□ 1.38
SS18-224ENST00000584083 ARHGEF16Q5VV41 709 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms