RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CPXCR1Q8N123 301 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 AGBL1Q96MI9 1066 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 ZMYND12Q9H0C1 365 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 ACAD9Q9H845 621 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 CPA4Q9UI42 421 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 SMC3Q9UQE7 1217 aa11.98□□□□□ -0.49
CCDC47-203ENST00000580986 RBM19Q9Y4C8 960 aaKnown RBP11.98□□□□□ -0.49
CCDC47-203ENST00000580986 PLXNB2O15031 1838 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 GPR25O00155 361 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 ERCC3P19447 782 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 CALML3P27482 149 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 GNA11P29992 359 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 LACTBP83111 547 aaPredicted RBP11.97□□□□□ -0.49
CCDC47-203ENST00000580986 SP3Q02447 781 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
CCDC47-203ENST00000580986 HEATR3Q7Z4Q2 680 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 DAGLBQ8NCG7 672 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 CLEC4DQ8WXI8 215 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 ALG1Q9BT22 464 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
CCDC47-203ENST00000580986 RNF146Q9NTX7 359 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 RIPK3Q9Y572 518 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 CASP8AP2Q9UKL3 1982 aa11.97□□□□□ -0.49
CCDC47-203ENST00000580986 SMCHD1A6NHR9 2005 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 OPLAHO14841 1288 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 ALAS1P13196 640 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 GJB2P29033 226 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 HSD17B4P51659 736 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 NAPAP54920 295 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 SNAP25P60880 206 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 PLS1Q14651 629 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 ARHGEF6Q15052 776 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 USH1GQ495M9 461 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 SPNS2Q8IVW8 549 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 FBXO18Q8NFZ0 1043 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 SOCS4Q8WXH5 440 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 CUL5Q93034 780 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 PHF20Q9BVI0 1012 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 PORCNQ9H237 461 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 R3HDMLQ9H3Y0 253 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 RIC8AQ9NPQ8 531 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 IVNS1ABPQ9Y6Y0 642 aa11.96□□□□□ -0.49
CCDC47-203ENST00000580986 DNAJC25-GNG10A0A024R161 153 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 SLC15A5A6NIM6 579 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 FKTNO75072 461 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 HSP90AA1P07900 732 aaKnown RBP11.95□□□□□ -0.5
CCDC47-203ENST00000580986 FCER1AP12319 257 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 PTPREP23469 700 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 MRPL12P52815 198 aaKnown RBP11.95□□□□□ -0.5
CCDC47-203ENST00000580986 EMP3P54852 163 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 FCGRTP55899 365 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 AP3B2Q13367 1082 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 TRIM29Q14134 588 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 GRB14Q14449 540 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 KIF22Q14807 665 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 MUM1L1Q5H9M0 696 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 GPR142Q7Z601 462 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 NCAPG2Q86XI2 1143 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
CCDC47-203ENST00000580986 CCAR1Q8IX12 1150 aaKnown RBP11.95□□□□□ -0.5
CCDC47-203ENST00000580986 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
CCDC47-203ENST00000580986 COA7Q96BR5 231 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 C8orf76Q96K31 380 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 PSTPIP2Q9H939 334 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 C6orf50Q9HD87 102 aa11.95□□□□□ -0.5
CCDC47-203ENST00000580986 DIS3Q9Y2L1 958 aaKnown RBP11.95□□□□□ -0.5
CCDC47-203ENST00000580986 FRMPD4Q14CM0 1322 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 NFIBO00712 420 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 MEIS2O14770 477 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 FOSP01100 380 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-203ENST00000580986 MMP1P03956 469 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 HOXC6P09630 235 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
CCDC47-203ENST00000580986 ADCY7P51828 1080 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 PRMT2P55345 433 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 MMRN1Q13201 1228 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 KCTD2Q14681 263 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 NPY5RQ15761 445 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 MORN1Q5T089 497 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 DNERQ8NFT8 737 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 PIBF1Q8WXW3 757 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 SHISA4Q96DD7 197 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 EFCC1Q9HA90 598 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 BRMS1Q9HCU9 246 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 A1CFQ9NQ94 594 aaKnown RBP11.94□□□□□ -0.5
CCDC47-203ENST00000580986 CYP39A1Q9NYL5 469 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 VPS54Q9P1Q0 977 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
CCDC47-203ENST00000580986 LCTP09848 1927 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms