RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 CD207Q9UJ71 328 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 VPS13AQ96RL7 3174 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 DMXL1Q9Y485 3027 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 ZNF292O60281 2723 aa9.69□□□□□ -0.86
PPP4R1-211ENST00000578875 TRIP12Q14669 1992 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 SIP14410 1827 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 POLR3DP05423 398 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 EEF2P13639 858 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 RRP1P56182 461 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 CHMP4BP1P59074 171 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 ADAM15Q13444 863 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 PUM1Q14671 1186 aaKnown RBP eCLIP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 CBX2Q14781 532 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 FBXO16Q8IX29 292 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 TMEM192Q8IY95 271 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 MRPL50Q8N5N7 158 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 MAGEB6Q8N7X4 407 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 TEX13BQ9BXU2 312 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 AKAP2Q9Y2D5 859 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 INSL6Q9Y581 213 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 MYH1P12882 1939 aa9.68□□□□□ -0.86
PPP4R1-211ENST00000578875 GRM6O15303 877 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 ZAP70P43403 619 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 ICA1Q05084 483 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 IQSEC1Q6DN90 963 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 CNKSR3Q6P9H4 555 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 TMEM179Q6ZVK1 233 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 DCLK2Q8N568 766 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 FAM133AQ8N9E0 248 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 DHX38Q92620 1227 aaKnown RBP9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 MSLNLQ96KJ4 702 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 ARHGEF10LQ9HCE6 1279 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 INCENPQ9NQS7 918 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 CLEC1BQ9P126 229 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 PCDHGC5Q9Y5F6 944 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 PARP14Q460N5 1801 aa9.67□□□□□ -0.86
PPP4R1-211ENST00000578875 FOCADQ5VW36 1801 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 ABHD14A-ACY1A0A1B0GW23 586 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 LGR5O75473 907 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 CXCL10P02778 98 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 COPB2P35606 906 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 HTRA4P83105 476 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 BFSP2Q13515 415 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 CCDC184Q52MB2 194 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 SP7Q8TDD2 431 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 SMOC2Q9H3U7 446 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 HOMER2Q9NSB8 354 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 DLL3Q9NYJ7 618 aa9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 MYO5AQ9Y4I1 1855 aaKnown RBP9.66□□□□□ -0.86
PPP4R1-211ENST00000578875 CEP250Q9BV73 2442 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 DMDP11532 3685 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 EYA4O95677 639 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 UQCRFS1P1P0C7P4 283 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 NUBP1P53384 320 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 IKBKEQ14164 716 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 MBTPS1Q14703 1052 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 PTGISQ16647 500 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 LRRC8DQ7L1W4 858 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 MYOCDQ8IZQ8 938 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 KCNG4Q8TDN1 519 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 SLF1Q9BQI6 1058 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 MTG1Q9BT17 334 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 MCM9Q9NXL9 1143 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 Q9Y3F1 56 aa9.65□□□□□ -0.86
PPP4R1-211ENST00000578875 DNAH14Q0VDD8 3507 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 CYP2D7A0A087X1C5 515 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 NCK2O43639 380 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 PI15O43692 258 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 UPP2O95045 317 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 UBTFL1P0CB47 393 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 SELPP16109 830 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 ICAM3P32942 547 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 CAMK1Q14012 370 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 PTPN21Q16825 1174 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 GDF6Q6KF10 455 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 TRAF7Q6Q0C0 670 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 FBXO11Q86XK2 927 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 COPS5Q92905 334 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 WNT8BQ93098 351 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 DBNDD2Q9BQY9 259 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 OSBPL7Q9BZF2 842 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 ANTXR1Q9H6X2 564 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 POLR3EQ9NVU0 708 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 NOD1Q9Y239 953 aa9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 USP15Q9Y4E8 981 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 FASNP49327 2511 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-211ENST00000578875 USP24Q9UPU5 2620 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 CKBP12277 381 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 SP100P23497 879 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 NDUFV1P49821 464 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 RBM10P98175 930 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 RSPO4Q2I0M5 234 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 LRRFIP1Q32MZ4 808 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 DUSP28Q4G0W2 176 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 TTC39AQ5SRH9 613 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 NFRKBQ6P4R8 1299 aa9.63□□□□□ -0.87
PPP4R1-211ENST00000578875 ADGRD2Q7Z7M1 963 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms