RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 KRT26Q7Z3Y9 468 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 NKIRAS1Q9NYS0 192 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 ESYT3A0FGR9 886 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 HMGB2P26583 209 aaKnown RBP13.25□□□□□ -0.29
ERBB2-206ENST00000578373 ANTXR2P58335 489 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 HDAC9Q9UKV0 1011 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 ADGRG1Q9Y653 693 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
ERBB2-206ENST00000578373 TTC26A0AVF1 554 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 POTEMA6NI47 508 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 TOM1O60784 492 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 GAS7O60861 476 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 EEF1GP26641 437 aaKnown RBP13.24□□□□□ -0.29
ERBB2-206ENST00000578373 E2F4Q16254 413 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 CELF1Q92879 486 aaKnown RBP13.24□□□□□ -0.29
ERBB2-206ENST00000578373 SFI1A8K8P3 1242 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
ERBB2-206ENST00000578373 CHP1Q99653 195 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 MED4Q9NPJ6 270 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 RWDD2AQ9UIY3 292 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 ARHGAP31Q2M1Z3 1444 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 PTPRMP28827 1452 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 ATP2A1O14983 1001 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 TRAF1Q13077 416 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 IFT88Q13099 833 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 EXOC3L4Q17RC7 722 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 PPM1KQ8N3J5 372 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 PANX2Q96RD6 677 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 ADGRB3O60242 1522 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 MYO3AQ8NEV4 1616 aa13.24□□□□□ -0.29
ERBB2-206ENST00000578373 CCNE1P24864 410 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 CACNB3P54284 484 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 DISC1Q9NRI5 854 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 LAMC1P11047 1609 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 PHLDB2Q86SQ0 1253 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 UBL4BQ8N7F7 174 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 MB21D1Q8N884 522 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 AP1M1Q9BXS5 423 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 STK38LQ9Y2H1 464 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 PTPN22Q9Y2R2 807 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 TRAPPC10P48553 1259 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 RABL6Q3YEC7 729 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-206ENST00000578373 FAM178BQ8IXR5 827 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-206ENST00000578373 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 ABHD10Q9NUJ1 306 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 KIF11P52732 1056 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 IRX3P78415 501 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-206ENST00000578373 ZBED6P86452 979 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 NAP1L3Q99457 506 aaPredicted RBP13.23□□□□□ -0.29
ERBB2-206ENST00000578373 TRIM10Q9UDY6 481 aa13.23□□□□□ -0.29
ERBB2-206ENST00000578373 RGS16O15492 202 aaPredicted RBP13.22□□□□□ -0.29
ERBB2-206ENST00000578373 GDF11O95390 407 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 PDIA6Q15084 440 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 SLFN13Q68D06 897 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 MROH7-TTC4A0A0A0MT08 1334 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 NCK2O43639 380 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 DLATP10515 647 aaKnown RBP13.22□□□□□ -0.29
ERBB2-206ENST00000578373 SLCO1A2P46721 670 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
ERBB2-206ENST00000578373 VSIG1Q86XK7 387 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 DHTKD1Q96HY7 919 aaPredicted RBP13.22□□□□□ -0.29
ERBB2-206ENST00000578373 SUGCTQ9HAC7 445 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 NFU1Q9UMS0 254 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 MESDQ14696 234 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 DENND2CQ68D51 928 aa13.22□□□□□ -0.29
ERBB2-206ENST00000578373 CD19P15391 556 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 ST3GAL1Q11201 340 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.29
ERBB2-206ENST00000578373 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 TEKT1Q969V4 418 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 ATP8A1Q9Y2Q0 1164 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 CEP152O94986 1710 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
ERBB2-206ENST00000578373 MAN2A1Q16706 1144 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 CERKLQ49MI3 558 aaPredicted RBP13.21□□□□□ -0.29
ERBB2-206ENST00000578373 WDR44Q5JSH3 913 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 STAG1Q8WVM7 1258 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.21□□□□□ -0.29
ERBB2-206ENST00000578373 USP42Q9H9J4 1324 aaKnown RBP13.21□□□□□ -0.29
ERBB2-206ENST00000578373 KRT15P19012 456 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 ICA1Q05084 483 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 PDCLQ13371 301 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 SH3RF3Q8TEJ3 882 aaPredicted RBP13.21□□□□□ -0.29
ERBB2-206ENST00000578373 PCIF1Q9H4Z3 704 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
ERBB2-206ENST00000578373 RIPOR2Q9Y4F9 1068 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 NRKQ7Z2Y5 1582 aa13.21□□□□□ -0.29
ERBB2-206ENST00000578373 GFPT2O94808 682 aa13.21□□□□□ -0.3
ERBB2-206ENST00000578373 TNNI1P19237 187 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms