RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MUTYHQ9UIF7 546 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 SYNPO2Q9UMS6 1093 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 PARP14Q460N5 1801 aa7.05□□□□□ -1.28
SMG6-219ENST00000575663 COL11A1P12107 1806 aaPredicted RBP7.04□□□□□ -1.28
SMG6-219ENST00000575663 MYO9BQ13459 2157 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 ABHD14A-ACY1A0A1B0GW23 586 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 NCK2O43639 380 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 KPNA6O60684 536 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 MBD4O95243 580 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 SELPP16109 830 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 PTGS1P23219 599 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 IRS1P35568 1242 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 PPP2R5BQ15173 497 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 NBPF20Q3BBV1 942 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 TAPT1Q6NXT6 567 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 LRRC8DQ7L1W4 858 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 ERMP1Q7Z2K6 904 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 BMP8AQ7Z5Y6 402 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 TMCO2Q7Z6W1 182 aaPredicted RBP7.04□□□□□ -1.28
SMG6-219ENST00000575663 AACSQ86V21 672 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 ERC1Q8IUD2 1116 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 RPAP2Q8IXW5 612 aaPredicted RBP7.04□□□□□ -1.28
SMG6-219ENST00000575663 BANK1Q8NDB2 785 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 SSH3Q8TE77 659 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 EAF2Q96CJ1 260 aaPredicted RBP7.04□□□□□ -1.28
SMG6-219ENST00000575663 MPHOSPH6Q99547 160 aaKnown RBP7.04□□□□□ -1.28
SMG6-219ENST00000575663 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
SMG6-219ENST00000575663 MKNK2Q9HBH9 465 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 PDGFCQ9NRA1 345 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 CLDND1Q9NY35 253 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 ADD3Q9UEY8 706 aaKnown RBP7.04□□□□□ -1.28
SMG6-219ENST00000575663 INSL6Q9Y581 213 aa7.04□□□□□ -1.28
SMG6-219ENST00000575663 TANC1Q9C0D5 1861 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 CYP2D7A0A087X1C5 515 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 LOC102724159A0A0B4J2E5 919 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 TCRBV5S4A2TA0A5A2 114 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 TMEM221A6NGB7 291 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 M0R296 226 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 GOLIM4O00461 696 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 NKRFO15226 690 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMG6-219ENST00000575663 PRKAB2O43741 272 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 AMHP03971 560 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 BMP3P12645 472 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 ALAS1P13196 640 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 TCF15Q12870 199 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 IKBKEQ14164 716 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 PWP2Q15269 919 aaKnown RBP7.03□□□□□ -1.28
SMG6-219ENST00000575663 SMAD2Q15796 467 aaKnown RBP7.03□□□□□ -1.28
SMG6-219ENST00000575663 PTGISQ16647 500 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 TCEAL5Q5H9L2 206 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 FAM117BQ6P1L5 589 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 FAM160B2Q86V87 743 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 GMCL1P1Q8NEA9 526 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 ANKS1AQ92625 1134 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 EDAQ92838 391 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 ATOH1Q92858 354 aaPredicted RBP7.03□□□□□ -1.28
SMG6-219ENST00000575663 PBXIP1Q96AQ6 731 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 TRERF1Q96PN7 1200 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
SMG6-219ENST00000575663 C17orf80Q9BSJ5 609 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 WDR11Q9BZH6 1224 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMG6-219ENST00000575663 ZNF287Q9HBT7 754 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 CYP39A1Q9NYL5 469 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 CLIP2Q9UDT6 1046 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
SMG6-219ENST00000575663 SLC4A4Q9Y6R1 1079 aa7.03□□□□□ -1.28
SMG6-219ENST00000575663 ZBED9Q6R2W3 1325 aa7.02□□□□□ -1.28
SMG6-219ENST00000575663 TMEM232C9JQI7 657 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 BCAR3O75815 825 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 TTLL1O95922 423 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 CXCL10P02778 98 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 TRIM27P14373 513 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 ADD2P35612 726 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 RARSP54136 660 aaKnown RBP7.02□□□□□ -1.29
SMG6-219ENST00000575663 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 ATP8B2P98198 1209 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 RBL2Q08999 1139 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 SMAD4Q13485 552 aaKnown RBP7.02□□□□□ -1.29
SMG6-219ENST00000575663 COL19A1Q14993 1142 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 EPC2Q52LR7 807 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 IER5LQ5T953 404 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 NSMFQ6X4W1 530 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 TRIM67Q6ZTA4 783 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 RPAINQ86UA6 219 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 RNF135Q8IUD6 432 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 HOMEZQ8IX15 550 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 MYOCDQ8IZQ8 938 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 LRRC47Q8N1G4 583 aaKnown RBP7.02□□□□□ -1.29
SMG6-219ENST00000575663 FBXL6Q8N531 539 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 MORC4Q8TE76 937 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 CHURC1Q8WUH1 139 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 YME1L1Q96TA2 773 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 FAM86C1Q9NVL1 165 aa7.02□□□□□ -1.29
SMG6-219ENST00000575663 EMSYQ7Z589 1322 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 ZNFX1Q9P2E3 1918 aaKnown RBP7.01□□□□□ -1.29
SMG6-219ENST00000575663 H3BNC9 293 aa7.01□□□□□ -1.29
SMG6-219ENST00000575663 STXBP3O00186 592 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms