RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MUM1L1Q5H9M0 696 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 TMEM67Q5HYA8 995 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 FAM122AQ96E09 287 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 SCLYQ96I15 445 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 PRR12Q9ULL5 1215 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 COG5Q9UP83 839 aa15.15■□□□□ 0.02
RNF40-208ENST00000565995 APPP05067 770 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
RNF40-208ENST00000565995 MCCP23508 829 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 PURAQ00577 322 aaKnown RBP15.14■□□□□ 0.01
RNF40-208ENST00000565995 TFF2Q03403 129 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 BTNL9Q6UXG8 535 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 KIAA1211Q6ZU35 1233 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 FBXO16Q8IX29 292 aaPredicted RBP15.14■□□□□ 0.01
RNF40-208ENST00000565995 SLC9A7Q96T83 725 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 NACAP1Q9BZK3 213 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 IL17RBQ9NRM6 502 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 DDX49Q9Y6V7 483 aaKnown RBP15.14■□□□□ 0.01
RNF40-208ENST00000565995 NLRC5Q86WI3 1866 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 TNKSO95271 1327 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 MICAL3Q7RTP6 2002 aa15.14■□□□□ 0.01
RNF40-208ENST00000565995 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 TLL1O43897 1013 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 ICAM1P05362 532 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
RNF40-208ENST00000565995 CPT1AP50416 773 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 KCNQ1P51787 676 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 PTPN11Q06124 597 aaPredicted RBP15.13■□□□□ 0.01
RNF40-208ENST00000565995 PPARAQ07869 468 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
RNF40-208ENST00000565995 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 NECAB3Q96P71 396 aaPredicted RBP15.13■□□□□ 0.01
RNF40-208ENST00000565995 DCTPP1Q9H773 170 aa15.13■□□□□ 0.01
RNF40-208ENST00000565995 TRMT13Q9NUP7 481 aaKnown RBP15.13■□□□□ 0.01
RNF40-208ENST00000565995 ADD3Q9UEY8 706 aaKnown RBP15.13■□□□□ 0.01
RNF40-208ENST00000565995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.13■□□□□ 0.01
RNF40-208ENST00000565995 ZBBXA8MT70 800 aa15.12■□□□□ 0.01
RNF40-208ENST00000565995 CA3P07451 260 aa15.12■□□□□ 0.01
RNF40-208ENST00000565995 ACTN1P12814 892 aa15.12■□□□□ 0.01
RNF40-208ENST00000565995 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
RNF40-208ENST00000565995 NFRKBQ6P4R8 1299 aa15.12■□□□□ 0.01
RNF40-208ENST00000565995 EEPD1Q7L9B9 569 aa15.12■□□□□ 0.01
RNF40-208ENST00000565995 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
RNF40-208ENST00000565995 WDR11Q9BZH6 1224 aa15.12■□□□□ 0.01
RNF40-208ENST00000565995 RANBP17Q9H2T7 1088 aaKnown RBP15.12■□□□□ 0.01
RNF40-208ENST00000565995 A6NJR5 290 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 RFXAPO00287 272 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 NKRFO15226 690 aaKnown RBP eCLIP15.11■□□□□ 0.01
RNF40-208ENST00000565995 GTPBP6O43824 516 aaPredicted RBP15.11■□□□□ 0.01
RNF40-208ENST00000565995 KPNA6O60684 536 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 FGRP09769 529 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 IQCF3P0C7M6 154 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 CYP2C9P11712 490 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 TAP1Q03518 808 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 IKQ13123 557 aaPredicted RBP15.11■□□□□ 0.01
RNF40-208ENST00000565995 ZMYM1Q5SVZ6 1142 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 GPATCH3Q96I76 525 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
RNF40-208ENST00000565995 SEC62Q99442 399 aaKnown RBP15.11■□□□□ 0.01
RNF40-208ENST00000565995 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 TTC41PQ6P2S7 1318 aa15.11■□□□□ 0.01
RNF40-208ENST00000565995 EPOPA6NHQ4 379 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 FOXP2O15409 715 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 SNAP25P60880 206 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 BAATQ14032 418 aaPredicted RBP15.1■□□□□ 0.01
RNF40-208ENST00000565995 NBPF20Q3BBV1 942 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 NSMFQ6X4W1 530 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 DEFB128Q7Z7B8 93 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 DCAF4Q8WV16 495 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 LRFN3Q9BTN0 628 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 NAPBQ9H115 298 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 LMCD1Q9NZU5 365 aa15.1■□□□□ 0.01
RNF40-208ENST00000565995 LPXNO60711 386 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 BAIAP3O94812 1187 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 EDNRBP24530 442 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 HERC6Q8IVU3 1022 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 MICALL1Q8N3F8 863 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 EPHX3Q9H6B9 360 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 STX8Q9UNK0 236 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 RALGAPA2Q2PPJ7 1873 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 ATG2AQ2TAZ0 1938 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 KAT6AQ92794 2004 aa15.09■□□□□ 0.01
RNF40-208ENST00000565995 KIF28PB7ZC32 967 aa15.08■□□□□ 0
RNF40-208ENST00000565995 ORC4O43929 436 aa15.08■□□□□ 0
RNF40-208ENST00000565995 NMT2O60551 498 aa15.08■□□□□ 0
RNF40-208ENST00000565995 GPR37L1O60883 481 aa15.08■□□□□ 0
RNF40-208ENST00000565995 ARHGEF15O94989 841 aa15.08■□□□□ 0
RNF40-208ENST00000565995 BFSP2Q13515 415 aa15.08■□□□□ 0
RNF40-208ENST00000565995 BRDTQ58F21 947 aaPredicted RBP15.08■□□□□ 0
RNF40-208ENST00000565995 DNERQ8NFT8 737 aa15.08■□□□□ 0
RNF40-208ENST00000565995 OR6J1Q8NGC5 347 aa15.08■□□□□ 0
RNF40-208ENST00000565995 PI4K2BQ8TCG2 481 aa15.08■□□□□ 0
RNF40-208ENST00000565995 CLEC4DQ8WXI8 215 aa15.08■□□□□ 0
RNF40-208ENST00000565995 HLA-CQ95604 372 aa15.08■□□□□ 0
RNF40-208ENST00000565995 MAF1Q9H063 256 aa15.08■□□□□ 0
RNF40-208ENST00000565995 GPHNQ9NQX3 736 aaPredicted RBP15.08■□□□□ 0
RNF40-208ENST00000565995 PNMA2Q9UL42 364 aa15.08■□□□□ 0
RNF40-208ENST00000565995 LAMA4Q16363 1823 aa15.08■□□□□ 0
RNF40-208ENST00000565995 MUC6Q6W4X9 2439 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms