RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 C16orf59Q7L2K0 433 aa11.25□□□□□ -0.61
AC055876.4-201ENST00000562515 RPUSD2Q8IZ73 545 aaKnown RBP11.25□□□□□ -0.61
AC055876.4-201ENST00000562515 OR6J1Q8NGC5 347 aa11.25□□□□□ -0.61
AC055876.4-201ENST00000562515 OTUD7AQ8TE49 926 aaPredicted RBP11.25□□□□□ -0.61
AC055876.4-201ENST00000562515 TRPV6Q9H1D0 765 aa11.25□□□□□ -0.61
AC055876.4-201ENST00000562515 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
AC055876.4-201ENST00000562515 PRUNE2Q8WUY3 3088 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 SUPT20HL2P0C7V6 817 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 ACTN1P12814 892 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 PTGS1P23219 599 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 CHMP4BP1P59074 171 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 PDE4DQ08499 809 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 BAATQ14032 418 aaPredicted RBP11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 PPP2R5BQ15173 497 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 AKNAD1Q5T1N1 836 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 EVI5LQ96CN4 794 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 SCLYQ96I15 445 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 WDR11Q9BZH6 1224 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 CXXC1Q9P0U4 656 aaPredicted RBP11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 NOD1Q9Y239 953 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 Q9Y3F1 56 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 TNKSO95271 1327 aa11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 COL4A4P53420 1690 aaPredicted RBP11.24□□□□□ -0.61
AC055876.4-201ENST00000562515 B4DLN1 442 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 NFIBO00712 420 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 PFKMP08237 780 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 RABGGTBP53611 331 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 NKX3-2P78367 333 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 DUSP28Q4G0W2 176 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 RASIP1Q5U651 963 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 TAPT1Q6NXT6 567 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 SLC30A10Q6XR72 485 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 RNF207Q6ZRF8 634 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 DEFB128Q7Z7B8 93 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 SLC43A3Q8NBI5 491 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 ATXN2LQ8WWM7 1075 aaKnown RBP11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 PURBQ96QR8 312 aaKnown RBP11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 WNT8AQ9H1J5 351 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 ALDH8A1Q9H2A2 487 aaPredicted RBP11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 RANBP17Q9H2T7 1088 aaKnown RBP11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 INCENPQ9NQS7 918 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 PNMA2Q9UL42 364 aa11.23□□□□□ -0.61
AC055876.4-201ENST00000562515 VCANP13611 3396 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 TRIM6-TRIM34B2RNG4 842 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 ORC4O43929 436 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 CYP2C9P11712 490 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 MRPS5P82675 430 aaKnown RBP11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 KIAA1217Q5T5P2 1943 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 ANKRD45Q5TZF3 282 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 VPS53Q5VIR6 699 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 TTBK2Q6IQ55 1244 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 RETREG2Q8NC44 543 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 ADAMTS19Q8TE59 1207 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 MTG1Q9BT17 334 aaPredicted RBP11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 HELLSQ9NRZ9 838 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 TRMT13Q9NUP7 481 aaKnown RBP11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 YBX2Q9Y2T7 364 aaKnown RBP11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 SCN10AQ9Y5Y9 1956 aa11.22□□□□□ -0.61
AC055876.4-201ENST00000562515 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 DHX16O60231 1041 aaKnown RBP11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 HAND2P61296 217 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 USH1GQ495M9 461 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 CCDC155Q8N6L0 562 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 SCFD2Q8WU76 684 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 ASB2Q96Q27 587 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 UHRF1Q96T88 793 aaPredicted RBP11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 TMEM47Q9BQJ4 181 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 FTOQ9C0B1 505 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 PCDHA11Q9Y5I1 949 aa11.21□□□□□ -0.61
AC055876.4-201ENST00000562515 TRIP12Q14669 1992 aaPredicted RBP11.21□□□□□ -0.62
AC055876.4-201ENST00000562515 GRIN2DO15399 1336 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 PDHBP11177 359 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 MYOGP15173 224 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 PURAQ00577 322 aaKnown RBP11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 BFSP2Q13515 415 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 ADGRE1Q14246 886 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 TMEM63BQ5T3F8 832 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 MFSD6Q6ZSS7 791 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 MORC4Q8TE76 937 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 RILPL2Q969X0 211 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 SLC9A7Q96T83 725 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 RNF41Q9H4P4 317 aaPredicted RBP11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
AC055876.4-201ENST00000562515 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
AC055876.4-201ENST00000562515 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms