RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 TINF2Q9BSI4 451 aa17.98■□□□□ 0.47
RABGGTA-219ENST00000560871 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
RABGGTA-219ENST00000560871 FAM217BQ9NTX9 383 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-219ENST00000560871 RBM28Q9NW13 759 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-219ENST00000560871 COLQQ9Y215 455 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-219ENST00000560871 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 POTEB2H3BUK9 544 aa17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 OPLAHO14841 1288 aa17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 EVI5O60447 810 aa17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 CNTN2Q02246 1040 aa17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 FUT2Q10981 343 aa17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
RABGGTA-219ENST00000560871 PNMA6FA0A0J9YX94 578 aa17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 CDC27P30260 824 aa17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 METAP2P50579 478 aaKnown RBP eCLIP17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 RPS6P62753 249 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 GHRHRQ02643 423 aa17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 BAATQ14032 418 aaPredicted RBP17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 RGS22Q8NE09 1264 aa17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 MAF1Q9H063 256 aa17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 MRPL11Q9Y3B7 192 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 MYH6P13533 1939 aa17.96■□□□□ 0.47
RABGGTA-219ENST00000560871 SEPT4O43236 478 aa17.95■□□□□ 0.46
RABGGTA-219ENST00000560871 PRAMEF19Q5SWL8 479 aa17.95■□□□□ 0.46
RABGGTA-219ENST00000560871 RNF207Q6ZRF8 634 aa17.95■□□□□ 0.46
RABGGTA-219ENST00000560871 RRP36Q96EU6 259 aaKnown RBP17.95■□□□□ 0.46
RABGGTA-219ENST00000560871 NRBP1Q9UHY1 535 aa17.95■□□□□ 0.46
RABGGTA-219ENST00000560871 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
RABGGTA-219ENST00000560871 PTPDC1A2A3K4 754 aa17.94■□□□□ 0.46
RABGGTA-219ENST00000560871 SNAI1O95863 264 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-219ENST00000560871 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-219ENST00000560871 PPP2R5BQ15173 497 aa17.94■□□□□ 0.46
RABGGTA-219ENST00000560871 TBC1D5Q92609 795 aa17.94■□□□□ 0.46
RABGGTA-219ENST00000560871 ALDH8A1Q9H2A2 487 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-219ENST00000560871 PDRG1Q9NUG6 133 aa17.94■□□□□ 0.46
RABGGTA-219ENST00000560871 ZNF865P0CJ78 1059 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 PDIA3P30101 505 aaKnown RBP17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 ALDH5A1P51649 535 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 TRAF1Q13077 416 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 ARMCX2Q7L311 632 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 MCF2L2Q86YR7 1114 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 CCDC82Q8N4S0 544 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 MORC4Q8TE76 937 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 PIBF1Q8WXW3 757 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 KIF2CQ99661 725 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 KATNBL1Q9H079 304 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 PRO3102Q9H379 93 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 COL20A1Q9P218 1284 aa17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 SEC63Q9UGP8 760 aaKnown RBP17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 NAP1L2Q9ULW6 460 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-219ENST00000560871 LOC102724159A0A0B4J2E5 919 aa17.92■□□□□ 0.46
RABGGTA-219ENST00000560871 CALML3P27482 149 aa17.92■□□□□ 0.46
RABGGTA-219ENST00000560871 RBM25P49756 843 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-219ENST00000560871 HSD17B4P51659 736 aa17.92■□□□□ 0.46
RABGGTA-219ENST00000560871 PWP2Q15269 919 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-219ENST00000560871 C7orf61Q8IZ16 206 aa17.92■□□□□ 0.46
RABGGTA-219ENST00000560871 SYTL5Q8TDW5 730 aaPredicted RBP17.92■□□□□ 0.46
RABGGTA-219ENST00000560871 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 hCG_1642624A0A1W2PR95 340 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 DNM1LO00429 736 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 EDNRBP24530 442 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 AK2P54819 239 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 NTRK3Q16288 839 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 ARRDC4Q8NCT1 418 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 ZNF274Q96GC6 653 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 LARP6Q9BRS8 491 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 C22orf23Q9BZE7 217 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 DDX49Q9Y6V7 483 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 MCM3APO60318 1980 aa17.91■□□□□ 0.46
RABGGTA-219ENST00000560871 ASB14A6NK59 587 aa17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 CFBP00751 764 aa17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 LRRC26Q2I0M4 334 aa17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 SAMD3Q8N6K7 520 aa17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 DNERQ8NFT8 737 aa17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 SENP6Q9GZR1 1112 aaPredicted RBP17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 ABHD16BQ9H3Z7 469 aa17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 NCOA5Q9HCD5 579 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 MAP3K20Q9NYL2 800 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 RBM27Q9P2N5 1060 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 ADD3Q9UEY8 706 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 BAZ2BQ9UIF8 2168 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-219ENST00000560871 CEP290O15078 2479 aa17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 CCT2P78371 535 aaKnown RBP17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 ACVR2BQ13705 512 aa17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 GJC2Q5T442 439 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 WWC2Q6AWC2 1192 aa17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 ZHX1Q9UKY1 873 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 TPCN1Q9ULQ1 816 aa17.89■□□□□ 0.45
RABGGTA-219ENST00000560871 AKR1A1P14550 325 aa17.88■□□□□ 0.45
RABGGTA-219ENST00000560871 IFNAR1P17181 557 aa17.88■□□□□ 0.45
RABGGTA-219ENST00000560871 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.45
RABGGTA-219ENST00000560871 NEK4P51957 841 aa17.88■□□□□ 0.45
RABGGTA-219ENST00000560871 GPKOWQ92917 476 aaPredicted RBP eCLIP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms