RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 PTPDC1A2A3K4 754 aa20.47■□□□□ 0.87
CRTC3-208ENST00000560098 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
CRTC3-208ENST00000560098 AKNAD1Q5T1N1 836 aa20.47■□□□□ 0.87
CRTC3-208ENST00000560098 MFSD6Q6ZSS7 791 aa20.47■□□□□ 0.87
CRTC3-208ENST00000560098 RILPL2Q969X0 211 aa20.47■□□□□ 0.87
CRTC3-208ENST00000560098 IL23AQ9NPF7 189 aa20.47■□□□□ 0.87
CRTC3-208ENST00000560098 GRXCR1A8MXD5 290 aa20.46■□□□□ 0.87
CRTC3-208ENST00000560098 ZNF543Q08ER8 600 aa20.46■□□□□ 0.87
CRTC3-208ENST00000560098 CLEC4DQ8WXI8 215 aa20.46■□□□□ 0.87
CRTC3-208ENST00000560098 PBX4Q9BYU1 374 aa20.46■□□□□ 0.87
CRTC3-208ENST00000560098 LCTP09848 1927 aa20.46■□□□□ 0.87
CRTC3-208ENST00000560098 B4GALT4O60513 344 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 SNHG28P0DPA3 235 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
CRTC3-208ENST00000560098 PSMC6P62333 389 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 AAMPQ13685 434 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 SLC30A10Q6XR72 485 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 TBC1D10CQ8IV04 446 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 WDR11Q9BZH6 1224 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 TRPV6Q9H1D0 765 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 RNF41Q9H4P4 317 aaPredicted RBP20.45■□□□□ 0.86
CRTC3-208ENST00000560098 UMODL1Q5DID0 1318 aa20.45■□□□□ 0.86
CRTC3-208ENST00000560098 CALML3P27482 149 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 PBX2P40425 430 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 RNF207Q6ZRF8 634 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 SMC5Q8IY18 1101 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 HERVK_113Q902F9 699 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 ESR2Q92731 530 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 NOC4LQ9BVI4 516 aaKnown RBP20.44■□□□□ 0.86
CRTC3-208ENST00000560098 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 RBM47A0AV96 593 aaKnown RBP20.44■□□□□ 0.86
CRTC3-208ENST00000560098 FGBP02675 491 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 SDSP20132 328 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 MTIF3Q9H2K0 278 aaKnown RBP20.44■□□□□ 0.86
CRTC3-208ENST00000560098 POLR3EQ9NVU0 708 aa20.44■□□□□ 0.86
CRTC3-208ENST00000560098 SPTBN5Q9NRC6 3674 aaKnown RBP20.43■□□□□ 0.86
CRTC3-208ENST00000560098 CPT1AP50416 773 aa20.43■□□□□ 0.86
CRTC3-208ENST00000560098 CCL23P55773 120 aa20.43■□□□□ 0.86
CRTC3-208ENST00000560098 RPS6P62753 249 aaKnown RBP20.43■□□□□ 0.86
CRTC3-208ENST00000560098 MPHOSPH6Q99547 160 aaKnown RBP20.43■□□□□ 0.86
CRTC3-208ENST00000560098 ALDH8A1Q9H2A2 487 aaPredicted RBP20.43■□□□□ 0.86
CRTC3-208ENST00000560098 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
CRTC3-208ENST00000560098 CXXC1Q9P0U4 656 aaPredicted RBP20.43■□□□□ 0.86
CRTC3-208ENST00000560098 NEDD4P46934 1319 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 ZNF213O14771 459 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 PURAQ00577 322 aaKnown RBP20.42■□□□□ 0.86
CRTC3-208ENST00000560098 PDE4DQ08499 809 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 GPATCH4Q5T3I0 446 aaKnown RBP20.42■□□□□ 0.86
CRTC3-208ENST00000560098 DGKHQ86XP1 1220 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 DNERQ8NFT8 737 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 OR6J1Q8NGC5 347 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 ZKSCAN3Q9BRR0 538 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 WNT8AQ9H1J5 351 aa20.42■□□□□ 0.86
CRTC3-208ENST00000560098 MYL3P08590 195 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 EDNRBP24530 442 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 NT5C2P49902 561 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 RAB30Q15771 203 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 OTOP2Q7RTS6 562 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 CHD1LQ86WJ1 897 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 PLEKHM2Q8IWE5 1019 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 OSBPL3Q9H4L5 887 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 GPHNQ9NQX3 736 aaPredicted RBP20.41■□□□□ 0.86
CRTC3-208ENST00000560098 MSRAQ9UJ68 235 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 CHD9Q3L8U1 2897 aa20.41■□□□□ 0.86
CRTC3-208ENST00000560098 NKRFO15226 690 aaKnown RBP eCLIP20.4■□□□□ 0.86
CRTC3-208ENST00000560098 SUPT20HL2P0C7V6 817 aa20.4■□□□□ 0.86
CRTC3-208ENST00000560098 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
CRTC3-208ENST00000560098 PPP2R5BQ15173 497 aa20.4■□□□□ 0.86
CRTC3-208ENST00000560098 USH1GQ495M9 461 aa20.4■□□□□ 0.86
CRTC3-208ENST00000560098 RPUSD2Q8IZ73 545 aaKnown RBP20.4■□□□□ 0.86
CRTC3-208ENST00000560098 SCFD2Q8WU76 684 aa20.4■□□□□ 0.86
CRTC3-208ENST00000560098 GAS2L1Q99501 681 aaPredicted RBP20.4■□□□□ 0.86
CRTC3-208ENST00000560098 MTG1Q9BT17 334 aaPredicted RBP20.4■□□□□ 0.86
CRTC3-208ENST00000560098 B4DLN1 442 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 MRPL12P52815 198 aaKnown RBP20.39■□□□□ 0.85
CRTC3-208ENST00000560098 BRDTQ58F21 947 aaPredicted RBP20.39■□□□□ 0.85
CRTC3-208ENST00000560098 CCDC178Q5BJE1 867 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 CWC27Q6UX04 472 aaKnown RBP20.39■□□□□ 0.85
CRTC3-208ENST00000560098 IQCA1Q86XH1 822 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 USP38Q8NB14 1042 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 RGS22Q8NE09 1264 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 TRMT13Q9NUP7 481 aaKnown RBP20.39■□□□□ 0.85
CRTC3-208ENST00000560098 TNKSO95271 1327 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 RAD50Q92878 1312 aa20.39■□□□□ 0.85
CRTC3-208ENST00000560098 KDM4AO75164 1064 aa20.38■□□□□ 0.85
CRTC3-208ENST00000560098 NUCB1Q02818 461 aa20.38■□□□□ 0.85
CRTC3-208ENST00000560098 PNMA1Q8ND90 353 aa20.38■□□□□ 0.85
CRTC3-208ENST00000560098 SCLYQ96I15 445 aa20.38■□□□□ 0.85
CRTC3-208ENST00000560098 CPVLQ9H3G5 476 aa20.38■□□□□ 0.85
CRTC3-208ENST00000560098 PRDM12Q9H4Q4 367 aa20.38■□□□□ 0.85
CRTC3-208ENST00000560098 DIAPH3Q9NSV4 1193 aa20.38■□□□□ 0.85
CRTC3-208ENST00000560098 IGHDP01880 384 aa20.37■□□□□ 0.85
CRTC3-208ENST00000560098 CYP2C9P11712 490 aa20.37■□□□□ 0.85
CRTC3-208ENST00000560098 ANKS1AQ92625 1134 aa20.37■□□□□ 0.85
CRTC3-208ENST00000560098 KAT14Q9H8E8 782 aa20.37■□□□□ 0.85
CRTC3-208ENST00000560098 A6NJR5 290 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 HIP1O00291 1037 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 KPNA6O60684 536 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms