RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 USP8P40818 1118 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 PRPHP41219 470 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 UBA7P41226 1012 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 PAPOLAP51003 745 aaKnown RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 COPAP53621 1224 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 ROR1Q01973 937 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 TNIP1Q15025 636 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 TRIP4Q15650 581 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 CPSF6Q16630 551 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 ARMC3Q5W041 872 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 ALKBH2Q6NS38 261 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 SLC4A10Q6U841 1118 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 USP51Q70EK9 711 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 RNF168Q8IYW5 571 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 CLASRPQ8N2M8 674 aaKnown RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 GIMAP8Q8ND71 665 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 TTC16Q8NEE8 873 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 GABPB2Q8TAK5 448 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 SLC7A3Q8WY07 619 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 ATP6V1E2Q96A05 226 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 CEP95Q96GE4 821 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 TRMT2BQ96GJ1 504 aaKnown RBP5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 SEC16BQ96JE7 1060 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 FBXL18Q96ME1 805 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 FAM129BQ96TA1 746 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 AP1M1Q9BXS5 423 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 GINM1Q9NU53 330 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 IRAK4Q9NWZ3 460 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 MCM8Q9UJA3 840 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 GTF3C4Q9UKN8 822 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 SPG7Q9UQ90 795 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 ITIH6Q6UXX5 1313 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 RAD50Q92878 1312 aa5.17□□□□□ -1.58
HMGB3P26-201ENST00000560051 SYNJ2BP-COX16A0A087WUM0 186 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 PRSS47A8MTI9 375 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 H0Y3Z8 333 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 SGTAO43765 313 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 FZD6O60353 706 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 HSPA5P11021 654 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 HARSP12081 509 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 KCNA6P17658 529 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 MAP4P27816 1152 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 CNGA1P29973 690 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 HSPA4P34932 840 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ZAP70P43403 619 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 PREPP48147 710 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 RAB27AP51159 221 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 CSE1LP55060 971 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 NLRP12P59046 1061 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 PFKPQ01813 784 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 CCDC15Q0P6D6 951 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 LRRC74AQ0VAA2 488 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 MRPL28Q13084 256 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 PRKG2Q13237 762 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 MOGSQ13724 837 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 EIF4A2Q14240 407 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 SLC9A5Q14940 896 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 SYCP1Q15431 976 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 FXNQ16595 210 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 GFOD2Q3B7J2 385 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ARMC4Q5T2S8 1044 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 COL13A1Q5TAT6 717 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 AGAP9Q5VTM2 703 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 NUTM2GQ5VZR2 741 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 TTC19Q6DKK2 380 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ALG1LQ6GMV1 187 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ZCCHC8Q6NZY4 707 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ZNF449Q6P9G9 518 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 CCBE1Q6UXH8 406 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 CATSPER4Q7RTX7 472 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 MAATS1Q7Z4T9 603 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 SDCCAG8Q86SQ7 713 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 TP53INP2Q8IXH6 220 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ELOA2Q8IYF1 753 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 SYNPOQ8N3V7 929 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 FBXL6Q8N531 539 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 C12orf50Q8NA57 414 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 GSDMBQ8TAX9 411 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 GPR152Q8TDT2 470 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ATXN2LQ8WWM7 1075 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 USP6NLQ92738 828 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ALKBH8Q96BT7 664 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 RSRC1Q96IZ7 334 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 TCHPQ9BT92 498 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 METTL22Q9BUU2 404 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ADAM19Q9H013 955 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 CYP4F12Q9HCS2 524 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 DDX21Q9NR30 783 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 ARHGAP28Q9P2N2 729 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 RABL2AQ9UBK7 228 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 CFAP45Q9UL16 551 aa5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 PA2G4Q9UQ80 394 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 DDX49Q9Y6V7 483 aaKnown RBP5.16□□□□□ -1.58
HMGB3P26-201ENST00000560051 H0YHG0 523 aa5.15□□□□□ -1.59
HMGB3P26-201ENST00000560051 TMCC2O75069 709 aa5.15□□□□□ -1.59
HMGB3P26-201ENST00000560051 KRT38O76015 456 aa5.15□□□□□ -1.59
HMGB3P26-201ENST00000560051 RASGRP1O95267 797 aa5.15□□□□□ -1.59
HMGB3P26-201ENST00000560051 RPLP1P05386 114 aaKnown RBP5.15□□□□□ -1.59
HMGB3P26-201ENST00000560051 TYRP1P17643 537 aa5.15□□□□□ -1.59
HMGB3P26-201ENST00000560051 DESP17661 470 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms