RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 GLT1D1Q96MS3 346 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 TOX2Q96NM4 488 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 UBE2OQ9C0C9 1292 aaKnown RBP20.5■□□□□ 0.87
SMAD3-210ENST00000559092 AP5M1Q9H0R1 490 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 STARD7Q9NQZ5 370 aa20.5■□□□□ 0.87
SMAD3-210ENST00000559092 FRMPD3Q5JV73 1810 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.49■□□□□ 0.87
SMAD3-210ENST00000559092 RBM47A0AV96 593 aaKnown RBP20.49■□□□□ 0.87
SMAD3-210ENST00000559092 MYADML2A6NDP7 307 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 CTAGE5O15320 804 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 SMPD1P17405 629 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 EDNRBP24530 442 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 NECTIN1Q15223 517 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 EEPD1Q7L9B9 569 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 ANKRD33Q7Z3H0 272 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 CATIPQ7Z7H3 387 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 FBXO16Q8IX29 292 aaPredicted RBP20.49■□□□□ 0.87
SMAD3-210ENST00000559092 TMTC2Q8N394 836 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 MAP3K14Q99558 947 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 AMNQ9BXJ7 453 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 ANO2Q9NQ90 1003 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 PDGFCQ9NRA1 345 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 ALPK3Q96L96 1907 aa20.49■□□□□ 0.87
SMAD3-210ENST00000559092 ZBTB5O15062 677 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 ASGR1P07306 291 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 MCM5P33992 734 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 ANTXR2P58335 489 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 MDM2Q00987 491 aaPredicted RBP20.48■□□□□ 0.87
SMAD3-210ENST00000559092 PDE4DQ08499 809 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 DUSP28Q4G0W2 176 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 CHST3Q7LGC8 479 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 TLK2Q86UE8 772 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 RIOX1Q9H6W3 641 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
SMAD3-210ENST00000559092 SMCHD1A6NHR9 2005 aa20.48■□□□□ 0.87
SMAD3-210ENST00000559092 LAMA3Q16787 3333 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 SLC27A2O14975 620 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 DYNC1LI2O43237 492 aaPredicted RBP20.47■□□□□ 0.87
SMAD3-210ENST00000559092 ZEB2O60315 1214 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 CABYRO75952 493 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 RNF20Q5VTR2 975 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 CREB3L3Q68CJ9 461 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 SKAP1Q86WV1 359 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 TDHQ8IZJ6 230 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 SAMD3Q8N6K7 520 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 SEZ6LQ9BYH1 1024 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 SENP2Q9HC62 589 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 PDLIM7Q9NR12 457 aa20.47■□□□□ 0.87
SMAD3-210ENST00000559092 MAP3K20Q9NYL2 800 aaKnown RBP20.47■□□□□ 0.87
SMAD3-210ENST00000559092 DCDC2CA8MYV0 355 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 CLTBP09497 229 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 CDK7P50613 346 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 FSCN1Q16658 493 aaKnown RBP20.46■□□□□ 0.87
SMAD3-210ENST00000559092 SYTL5Q8TDW5 730 aaPredicted RBP20.46■□□□□ 0.87
SMAD3-210ENST00000559092 NSUN6Q8TEA1 469 aaKnown RBP20.46■□□□□ 0.87
SMAD3-210ENST00000559092 VTI1AQ96AJ9 217 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 TMEM87BQ96K49 555 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 IWS1Q96ST2 819 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 WDR11Q9BZH6 1224 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 LY9Q9HBG7 655 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 PRDM5Q9NQX1 630 aaPredicted RBP20.46■□□□□ 0.87
SMAD3-210ENST00000559092 MROH7Q68CQ1 1323 aa20.46■□□□□ 0.87
SMAD3-210ENST00000559092 KIAA0355O15063 1070 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 NKRFO15226 690 aaKnown RBP eCLIP20.45■□□□□ 0.865e-6■□□□□ 8.8
SMAD3-210ENST00000559092 PRC1O43663 620 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 PQBP1O60828 265 aaKnown RBP20.45■□□□□ 0.86
SMAD3-210ENST00000559092 CDC45O75419 566 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 IRX5P78411 483 aaPredicted RBP20.45■□□□□ 0.86
SMAD3-210ENST00000559092 GHRHRQ02643 423 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 LRIT3Q3SXY7 679 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 SCFD2Q8WU76 684 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 TBC1D5Q92609 795 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 PCDHA1Q9Y5I3 950 aa20.45■□□□□ 0.86
SMAD3-210ENST00000559092 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
SMAD3-210ENST00000559092 TRIM43BA6NCK2 446 aa20.44■□□□□ 0.86
SMAD3-210ENST00000559092 DDAH1O94760 285 aa20.44■□□□□ 0.86
SMAD3-210ENST00000559092 SMARCA1P28370 1054 aa20.44■□□□□ 0.86
SMAD3-210ENST00000559092 KIF5BP33176 963 aa20.44■□□□□ 0.86
SMAD3-210ENST00000559092 LIFRP42702 1097 aa20.44■□□□□ 0.86
SMAD3-210ENST00000559092 BEX3Q00994 111 aa20.44■□□□□ 0.86
SMAD3-210ENST00000559092 TRIM43Q96BQ3 446 aaPredicted RBP20.44■□□□□ 0.86
SMAD3-210ENST00000559092 LZTS2Q9BRK4 669 aa20.44■□□□□ 0.86
SMAD3-210ENST00000559092 SZT2Q5T011 3432 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 PNMA6FA0A0J9YX94 578 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 ARVCFO00192 962 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 HSD17B4P51659 736 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 FAAP100Q0VG06 881 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 SLC35G1Q2M3R5 365 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 GPR153Q6NV75 609 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 SH3RF1Q7Z6J0 888 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 ZNF654Q8IZM8 581 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 TAAR1Q96RJ0 339 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 TMEM39AQ9NV64 488 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 PCDH10Q9P2E7 1040 aa20.43■□□□□ 0.86
SMAD3-210ENST00000559092 SH2B2O14492 632 aaPredicted RBP20.42■□□□□ 0.86
SMAD3-210ENST00000559092 CYTH3O43739 400 aa20.42■□□□□ 0.86
SMAD3-210ENST00000559092 PPP1R11O60927 126 aaPredicted RBP20.42■□□□□ 0.86
SMAD3-210ENST00000559092 NEFLP07196 543 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms