RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TRIM9Q9C026 710 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 EHD4Q9H223 541 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 RGS17Q9UGC6 210 aaPredicted RBP11.87□□□□□ -0.51
TPM1-210ENST00000558264 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
TPM1-210ENST00000558264 PCDHA1Q9Y5I3 950 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 SIPA1L1O43166 1804 aa11.87□□□□□ -0.51
TPM1-210ENST00000558264 AKR1B15C9JRZ8 316 aaPredicted RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 RNF225M0QZC1 329 aaPredicted RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 RRP9O43818 475 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 MARCH6O60337 910 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 ERCC3P19447 782 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 COPB1P53618 953 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 NCBP1Q09161 790 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 GRB10Q13322 594 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 ABCB5Q2M3G0 1257 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 FILIP1LQ4L180 1135 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 TCP11X2Q5H9J9 407 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 KCNK18Q7Z418 384 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 PPFIBP1Q86W92 1011 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 REXO1L1PQ8IX06 675 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 CCDC17Q96LX7 622 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 IDI2Q9BXS1 227 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 DHX36Q9H2U1 1008 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 PPP2R2CQ9Y2T4 447 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 F5H6K3 240 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 NKRFO15226 690 aaKnown RBP eCLIP11.86□□□□□ -0.51
TPM1-210ENST00000558264 HMGB2P26583 209 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 KLRC3Q07444 240 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 SNX29Q8TEQ0 813 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 CALML4Q96GE6 196 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 CDK5RAP3Q96JB5 506 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 AK8Q96MA6 479 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 PNMA5Q96PV4 448 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 SRRTQ9BXP5 876 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 KANSL2Q9H9L4 492 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 SLC39A2Q9NP94 309 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 EXOC1Q9NV70 894 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
TPM1-210ENST00000558264 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
TPM1-210ENST00000558264 ARHGAP6O43182 974 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 CTIFO43310 598 aaKnown RBP11.85□□□□□ -0.51
TPM1-210ENST00000558264 GYPCP04921 128 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 ECE1P42892 770 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 ZYXQ15942 572 aaKnown RBP11.85□□□□□ -0.51
TPM1-210ENST00000558264 ECM1Q16610 540 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 A0A1W2PRG0 241 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 hCG_1984214I3L0E3 225 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 NDUFB10O96000 172 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 PBX1P40424 430 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 ZNF713Q8N859 430 aaPredicted RBP11.85□□□□□ -0.51
TPM1-210ENST00000558264 P2RX7Q99572 595 aaKnown RBP11.85□□□□□ -0.51
TPM1-210ENST00000558264 KCND1Q9NSA2 647 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 BLOC1S4Q9NUP1 217 aa11.85□□□□□ -0.51
TPM1-210ENST00000558264 MYMKA6NI61 221 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 PSMD14O00487 310 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 SSBP05455 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
TPM1-210ENST00000558264 IDEP14735 1019 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 CLK2P49760 499 aaKnown RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 MRPL12P52815 198 aaKnown RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 UBXN1Q04323 297 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 TMEM266Q2M3C6 531 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 RAD9BQ6WBX8 426 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 CCDC84Q86UT8 332 aaPredicted RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 LARGE2Q8N3Y3 721 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 GIMAP8Q8ND71 665 aaPredicted RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 HAS1Q92839 578 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 CTAGE1Q96RT6 745 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 LIMA1Q9UHB6 759 aaKnown RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 PSMA7O14818 248 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 MFAP3LO75121 409 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 STAT3P40763 770 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 RAD51AP2Q09MP3 1159 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 TATDN1Q6P1N9 297 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 TRIM65Q6PJ69 517 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 MRPL44Q9H9J2 332 aaKnown RBP11.84□□□□□ -0.51
TPM1-210ENST00000558264 LZTFL1Q9NQ48 299 aa11.84□□□□□ -0.51
TPM1-210ENST00000558264 STX10O60499 249 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.51
TPM1-210ENST00000558264 KCNJ6P48051 423 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 CACNB1Q02641 598 aaPredicted RBP11.83□□□□□ -0.51
TPM1-210ENST00000558264 KCNB1Q14721 858 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.51
TPM1-210ENST00000558264 ANKRD40Q6AI12 368 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 MIGA2Q7L4E1 593 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 CSGALNACT2Q8N6G5 542 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 KIAA0895Q8NCT3 520 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.51
TPM1-210ENST00000558264 NYAP2Q9P242 653 aa11.83□□□□□ -0.51
TPM1-210ENST00000558264 B4DLN1 442 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms