RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DNM2P50570 870 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 KIF11P52732 1056 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 GUCY2DQ02846 1103 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 ELOA2Q8IYF1 753 aaPredicted RBP18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 P2RX5Q93086 422 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 DNAJC7Q99615 494 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 MED4Q9NPJ6 270 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 MINPP1Q9UNW1 487 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 POTEDQ86YR6 584 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 CREG2Q8IUH2 290 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 IPO4Q8TEX9 1081 aaKnown RBP18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 COA7Q96BR5 231 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 NUDT12Q9BQG2 462 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 TCP11L1Q9NUJ3 509 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 SLAIN2Q9P270 581 aa18.97■□□□□ 0.63
PPP4R3A-208ENST00000555462 PPFIA4O75335 1185 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 MTMR8Q96EF0 704 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 CAPS2Q9BXY5 557 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 SEMA6BQ9H3T3 888 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 RNF187Q5TA31 235 aaPredicted RBP18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 WDR93Q6P2C0 686 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 KAT2BQ92831 832 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 NSUN4Q96CB9 384 aaKnown RBP18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 CCDC43Q96MW1 224 aaKnown RBP18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 TSPYL1Q9H0U9 437 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 EPB41L5Q9HCM4 733 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 PCDHA4Q9UN74 947 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 FAM169AQ9Y6X4 670 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 PKD1L3Q7Z443 1732 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 SEMA3EO15041 775 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 MAGEA9P43362 315 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 EHHADHQ08426 723 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 DDX42Q86XP3 938 aaKnown RBP eCLIP18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 CRNKL1Q9BZJ0 848 aaKnown RBP18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 ZC3H4Q9UPT8 1303 aaKnown RBP18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 GLI3P10071 1580 aa18.96■□□□□ 0.63
PPP4R3A-208ENST00000555462 H0YHG0 523 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 MARCH6O60337 910 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 BMP15O95972 392 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 SRGNP10124 158 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 INTS5Q6P9B9 1019 aaKnown RBP18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 ADAT2Q7Z6V5 191 aaKnown RBP18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 TICAM2Q86XR7 235 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 KIAA0895Q8NCT3 520 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 SH3RF3Q8TEJ3 882 aaPredicted RBP18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 OSBPL9Q96SU4 736 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 NDUFAB1O14561 156 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 GLI1P08151 1106 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 HLTFQ14527 1009 aaKnown RBP eCLIP18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 MIIPQ5JXC2 388 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 KRT12Q99456 494 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 PACSIN1Q9BY11 444 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 TRIM9Q9C026 710 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 CCDC87Q9NVE4 849 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 EBAG9O00559 213 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 TACC1O75410 805 aa18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 LONP1P36776 959 aaKnown RBP18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 SRP68Q9UHB9 627 aaKnown RBP18.95■□□□□ 0.62
PPP4R3A-208ENST00000555462 COL1A1P02452 1464 aaPredicted RBP18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 SMCO2A6NFE2 343 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 KLRF2D3W0D1 207 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 MYO1FO00160 1098 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 MNAT1P51948 309 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 TRIM14Q14142 442 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 PAPD7Q5XG87 772 aaKnown RBP18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 C8orf74Q6P047 294 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 MAATS1Q7Z4T9 603 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 USP54Q70EL1 1684 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 PDS5AQ29RF7 1337 aaKnown RBP18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 NPHP3-ACAD11A0A0J9YXS1 232 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 IL6STP40189 918 aaPredicted RBP18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 CORO7P57737 925 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 ZBED6P86452 979 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 TTMPQ5BVD1 217 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 CCDC70Q6NSX1 233 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 ZNF444Q8N0Y2 327 aaPredicted RBP18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 CDK5RAP3Q96JB5 506 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 MYO1AQ9UBC5 1043 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 SNX12Q9UMY4 172 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 HYOU1Q9Y4L1 999 aa18.94■□□□□ 0.62
PPP4R3A-208ENST00000555462 CKAP4Q07065 602 aaKnown RBP18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 GIMAP8Q8ND71 665 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 TBCKQ8TEA7 893 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 TRIM31Q9BZY9 425 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 USO1O60763 962 aaKnown RBP18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 TDP2O95551 362 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 VAV2P52735 878 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 PIGSQ96S52 555 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 FGFBP2Q9BYJ0 223 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 PPANQ9NQ55 473 aaKnown RBP18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 COL5A2P05997 1499 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 EP400Q96L91 3159 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 NTSR2O95665 410 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 CALM1P0DP23 149 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 CALM2P0DP24 149 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 CALM3P0DP25 149 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 KIF5BP33176 963 aa18.93■□□□□ 0.62
PPP4R3A-208ENST00000555462 MKRN4PQ13434 485 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms