RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SYTL4Q96C24 671 aaPredicted RBP5.62□□□□□ -1.51
VTI1B-203ENST00000554636 TNKS2Q9H2K2 1166 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 RC3H2Q9HBD1 1191 aaKnown RBP5.62□□□□□ -1.51
VTI1B-203ENST00000554636 COPRSQ9NQ92 184 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 RNF114Q9Y508 228 aa5.62□□□□□ -1.51
VTI1B-203ENST00000554636 KDM6AO15550 1401 aaPredicted RBP5.62□□□□□ -1.51
VTI1B-203ENST00000554636 H3BS24 57 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 TLR3O15455 904 aaKnown RBP5.61□□□□□ -1.51
VTI1B-203ENST00000554636 ZBTB7AO95365 584 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 CST3P01034 146 aaPredicted RBP5.61□□□□□ -1.51
VTI1B-203ENST00000554636 RNASE1P07998 156 aaKnown RBP5.61□□□□□ -1.51
VTI1B-203ENST00000554636 C4BP0C0L5 1744 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 PLCG1P19174 1290 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 FUT4P22083 530 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 CC2D1BQ5T0F9 858 aaKnown RBP5.61□□□□□ -1.51
VTI1B-203ENST00000554636 PNPLA7Q6ZV29 1317 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 GOLM1Q8NBJ4 401 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 FBXO27Q8NI29 283 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 PALLDQ8WX93 1383 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 ACSF2Q96CM8 615 aaPredicted RBP5.61□□□□□ -1.51
VTI1B-203ENST00000554636 RHOVQ96L33 236 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 HSPA12BQ96MM6 686 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 TMEM74Q96NL1 305 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 SPON1Q9HCB6 807 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 KBTBD4Q9NVX7 518 aa5.61□□□□□ -1.51
VTI1B-203ENST00000554636 UBR3Q6ZT12 1888 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 ADAMTS7Q9UKP4 1686 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 MRC1P22897 1456 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 UPK3BL1B0FP48 263 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 UPK3BL2E5RIL1 263 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 CAP2P40123 477 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 MTHFSP49914 203 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 LMNB2Q03252 620 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 SULT6B1Q6IMI4 303 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 MRPL41Q8IXM3 137 aaKnown RBP5.6□□□□□ -1.51
VTI1B-203ENST00000554636 IFNL2Q8IZJ0 200 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 LRRN4CLQ8ND94 238 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 FAM13CQ8NE31 585 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 ASB11Q8WXH4 323 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 GATAD2BQ8WXI9 593 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 PIGBQ92521 554 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 MBNL3Q9NUK0 354 aaKnown RBP5.6□□□□□ -1.51
VTI1B-203ENST00000554636 KLHL3Q9UH77 587 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 CCNL1Q9UK58 526 aaPredicted RBP5.6□□□□□ -1.51
VTI1B-203ENST00000554636 VIRMAQ69YN4 1812 aaKnown RBP5.6□□□□□ -1.51
VTI1B-203ENST00000554636 SCN11AQ9UI33 1791 aa5.6□□□□□ -1.51
VTI1B-203ENST00000554636 PITPNM2Q9BZ72 1349 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 FAM221AA4D161 298 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 CILPO75339 1184 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 CLCN7P51798 805 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 ZP2Q05996 745 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 PLEKHO1Q53GL0 409 aaPredicted RBP5.59□□□□□ -1.51
VTI1B-203ENST00000554636 SLC6A19Q695T7 634 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 MCATQ8IVS2 390 aaKnown RBP5.59□□□□□ -1.51
VTI1B-203ENST00000554636 MTFR1LQ9H019 292 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 ATP13A1Q9HD20 1204 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 SNX11Q9Y5W9 270 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 TACC3Q9Y6A5 838 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 CAPN6Q9Y6Q1 641 aa5.59□□□□□ -1.51
VTI1B-203ENST00000554636 COL5A3P25940 1745 aaPredicted RBP5.59□□□□□ -1.51
VTI1B-203ENST00000554636 ZNF831Q5JPB2 1677 aa5.59□□□□□ -1.52
VTI1B-203ENST00000554636 CICQ96RK0 1608 aaPredicted RBP5.59□□□□□ -1.52
VTI1B-203ENST00000554636 MAP3K5Q99683 1374 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 TJP1Q07157 1748 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-203ENST00000554636 PAPLNO95428 1278 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 HSP90AB1P08238 724 aaKnown RBP5.58□□□□□ -1.52
VTI1B-203ENST00000554636 CYP7A1P22680 504 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 ITPK1Q13572 414 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 PWP1Q13610 501 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 AMOTQ4VCS5 1084 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 ZNF746Q6NUN9 644 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-203ENST00000554636 ZNF530Q6P9A1 599 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-203ENST00000554636 AMIGO3Q86WK7 504 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 LINC00116Q8NCU8 138 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 SMARCC1Q92922 1105 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-203ENST00000554636 RSRP1Q9BUV0 290 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 CARS2Q9HA77 564 aaKnown RBP5.58□□□□□ -1.52
VTI1B-203ENST00000554636 TMOD3Q9NYL9 352 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 REV1Q9UBZ9 1251 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 GGT7Q9UJ14 662 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 ADAM30Q9UKF2 790 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 ASAP1Q9ULH1 1129 aa5.58□□□□□ -1.52
VTI1B-203ENST00000554636 POLR3KQ9Y2Y1 108 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-203ENST00000554636 MYH14Q7Z406 1995 aaKnown RBP5.57□□□□□ -1.52
VTI1B-203ENST00000554636 ERVV-2B6SEH9 535 aa5.57□□□□□ -1.52
VTI1B-203ENST00000554636 DIAPH1O60610 1272 aaKnown RBP5.57□□□□□ -1.52
VTI1B-203ENST00000554636 HMOX1P09601 288 aa5.57□□□□□ -1.52
VTI1B-203ENST00000554636 ZNF865P0CJ78 1059 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-203ENST00000554636 TNNI2P48788 182 aa5.57□□□□□ -1.52
VTI1B-203ENST00000554636 MFAP1P55081 439 aaKnown RBP5.57□□□□□ -1.52
VTI1B-203ENST00000554636 TNK2Q07912 1038 aa5.57□□□□□ -1.52
VTI1B-203ENST00000554636 CCDC84Q86UT8 332 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-203ENST00000554636 COL23A1Q86Y22 540 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-203ENST00000554636 BCL11AQ9H165 835 aa5.57□□□□□ -1.52
VTI1B-203ENST00000554636 ZSWIM5Q9P217 1185 aa5.57□□□□□ -1.52
VTI1B-203ENST00000554636 PPP1R1BQ9UD71 204 aaPredicted RBP5.57□□□□□ -1.52
VTI1B-203ENST00000554636 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 WASH4PA8MWX3 477 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms