RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 RAD50Q92878 1312 aa7.76□□□□□ -1.17
SLIRP-203ENST00000554074 KAT6AQ92794 2004 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 RBM47A0AV96 593 aaKnown RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 B4DLN1 442 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 NFIBO00712 420 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 TLR3O15455 904 aaKnown RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 CD4P01730 458 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 SMPD1P17405 629 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 EDNRBP24530 442 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 MRPL12P52815 198 aaKnown RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 SNAP25P60880 206 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 BAATQ14032 418 aaPredicted RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 DUSP28Q4G0W2 176 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 ASPRV1Q53RT3 343 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 FBXO16Q8IX29 292 aaPredicted RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 CLEC4DQ8WXI8 215 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 CHMP4CQ96CF2 233 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
SLIRP-203ENST00000554074 GUCD1Q96NT3 240 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 KRT23Q9C075 422 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 AP5M1Q9H0R1 490 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 CNNM2Q9H8M5 875 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 GPCPD1Q9NPB8 672 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 MTMR7Q9Y216 660 aa7.75□□□□□ -1.17
SLIRP-203ENST00000554074 PTPDC1A2A3K4 754 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 NKRFO15226 690 aaKnown RBP eCLIP7.74□□□□□ -1.17
SLIRP-203ENST00000554074 DYNC1LI2O43237 492 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-203ENST00000554074 KDM4AO75164 1064 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 EPHB4P54760 987 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 IRX5P78411 483 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-203ENST00000554074 BEX3Q00994 111 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 PPIGQ13427 754 aaKnown RBP eCLIP7.74□□□□□ -1.17
SLIRP-203ENST00000554074 ITGA7Q13683 1181 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 SLC30A10Q6XR72 485 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 RNF207Q6ZRF8 634 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 NOL8Q76FK4 1167 aaKnown RBP7.74□□□□□ -1.17
SLIRP-203ENST00000554074 TMEM199Q8N511 208 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 PNMA1Q8ND90 353 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 TET1Q8NFU7 2136 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 VTI1AQ96AJ9 217 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 ZSCAN10Q96SZ4 725 aaPredicted RBP7.74□□□□□ -1.17
SLIRP-203ENST00000554074 KAT14Q9H8E8 782 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 PDGFCQ9NRA1 345 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 ZSWIM5Q9P217 1185 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 ABCB11O95342 1321 aa7.74□□□□□ -1.17
SLIRP-203ENST00000554074 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.73□□□□□ -1.17
SLIRP-203ENST00000554074 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.73□□□□□ -1.17
SLIRP-203ENST00000554074 B4E1Z4 1266 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 KPNA6O60684 536 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 CPT1AP50416 773 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 RPS6P62753 249 aaKnown RBP7.73□□□□□ -1.17
SLIRP-203ENST00000554074 GHRHRQ02643 423 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 CDC37Q16543 378 aaPredicted RBP7.73□□□□□ -1.17
SLIRP-203ENST00000554074 TTC22Q5TAA0 569 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 RASIP1Q5U651 963 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 ERICH6BQ5W0A0 696 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 PSRC1Q6PGN9 363 aaPredicted RBP7.73□□□□□ -1.17
SLIRP-203ENST00000554074 CXCL17Q6UXB2 119 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 EEPD1Q7L9B9 569 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 ENAHQ8N8S7 591 aaPredicted RBP7.73□□□□□ -1.17
SLIRP-203ENST00000554074 SCFD2Q8WU76 684 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 PURBQ96QR8 312 aaKnown RBP7.73□□□□□ -1.17
SLIRP-203ENST00000554074 ZKSCAN3Q9BRR0 538 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 UBAC1Q9BSL1 405 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 WDR11Q9BZH6 1224 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 POLR3EQ9NVU0 708 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 GRIN2DO15399 1336 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 TNKSO95271 1327 aa7.73□□□□□ -1.17
SLIRP-203ENST00000554074 PRUNE2Q8WUY3 3088 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 PARP1P09874 1014 aaKnown RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 SUPT20HL2P0C7V6 817 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 GOLGA8HP0CJ92 632 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 GSPT1P15170 499 aaKnown RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 CALML3P27482 149 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 PDE4AP27815 886 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 PURAQ00577 322 aaKnown RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 PDE4DQ08499 809 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 PPP2R5BQ15173 497 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 SEC23AQ15436 765 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 BRDTQ58F21 947 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 TMEM240Q5SV17 173 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 ADGRF4Q8IZF3 695 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 SAMD3Q8N6K7 520 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 RUFY2Q8WXA3 655 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 MTMR8Q96EF0 704 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 CDX2Q99626 313 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.72□□□□□ -1.176e-7■■■□□ 18.5
SLIRP-203ENST00000554074 UBA5Q9GZZ9 404 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 TTYH1Q9H313 450 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 HIPK3Q9H422 1215 aa7.72□□□□□ -1.17
SLIRP-203ENST00000554074 MAP3K20Q9NYL2 800 aaKnown RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 DDX49Q9Y6V7 483 aaKnown RBP7.72□□□□□ -1.17
SLIRP-203ENST00000554074 DOCK5Q9H7D0 1870 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms