RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 COPB2P35606 906 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 PURAQ00577 322 aaKnown RBP16.38■□□□□ 0.21
SNRPF-203ENST00000551316 TAPT1Q6NXT6 567 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNRPF-203ENST00000551316 EEPD1Q7L9B9 569 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 ADSSL1Q8N142 457 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 MEIS3Q99687 375 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 ARHGEF10LQ9HCE6 1279 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 FAM50BQ9Y247 325 aa16.38■□□□□ 0.21
SNRPF-203ENST00000551316 NBNO60934 754 aa16.37■□□□□ 0.21
SNRPF-203ENST00000551316 EEF2P13639 858 aaKnown RBP16.37■□□□□ 0.21
SNRPF-203ENST00000551316 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
SNRPF-203ENST00000551316 EPC2Q52LR7 807 aa16.37■□□□□ 0.21
SNRPF-203ENST00000551316 FAM47CQ5HY64 1035 aa16.37■□□□□ 0.21
SNRPF-203ENST00000551316 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
SNRPF-203ENST00000551316 DHX38Q92620 1227 aaKnown RBP16.37■□□□□ 0.21
SNRPF-203ENST00000551316 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
SNRPF-203ENST00000551316 AP5M1Q9H0R1 490 aa16.37■□□□□ 0.21
SNRPF-203ENST00000551316 NSUN3Q9H649 340 aaKnown RBP16.37■□□□□ 0.21
SNRPF-203ENST00000551316 RAVER2Q9HCJ3 691 aaKnown RBP16.37■□□□□ 0.21
SNRPF-203ENST00000551316 POLR3DP05423 398 aaPredicted RBP16.36■□□□□ 0.21
SNRPF-203ENST00000551316 SUPT20HL2P0C7V6 817 aa16.36■□□□□ 0.21
SNRPF-203ENST00000551316 HYAL1Q12794 435 aa16.36■□□□□ 0.21
SNRPF-203ENST00000551316 PKN1Q16512 942 aa16.36■□□□□ 0.21
SNRPF-203ENST00000551316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.36■□□□□ 0.213e-7■■■■□ 22.7
SNRPF-203ENST00000551316 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
SNRPF-203ENST00000551316 SEZ6LQ9BYH1 1024 aa16.36■□□□□ 0.21
SNRPF-203ENST00000551316 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
SNRPF-203ENST00000551316 GALR2O43603 387 aaPredicted RBP16.35■□□□□ 0.21
SNRPF-203ENST00000551316 RAD21O60216 631 aa16.35■□□□□ 0.21
SNRPF-203ENST00000551316 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
SNRPF-203ENST00000551316 ARP10275 920 aa16.35■□□□□ 0.21
SNRPF-203ENST00000551316 SIGLEC14Q08ET2 396 aa16.35■□□□□ 0.21
SNRPF-203ENST00000551316 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
SNRPF-203ENST00000551316 SMAD4Q13485 552 aaKnown RBP16.35■□□□□ 0.21
SNRPF-203ENST00000551316 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
SNRPF-203ENST00000551316 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
SNRPF-203ENST00000551316 SLF1Q9BQI6 1058 aa16.35■□□□□ 0.21
SNRPF-203ENST00000551316 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
SNRPF-203ENST00000551316 HOMER2Q9NSB8 354 aa16.35■□□□□ 0.21
SNRPF-203ENST00000551316 TLR7Q9NYK1 1049 aaKnown RBP16.35■□□□□ 0.21
SNRPF-203ENST00000551316 CYP2D7A0A087X1C5 515 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 LOC730098B7Z3J9 87 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 SRGAP3O43295 1099 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 CSPG5O95196 566 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 MYL3P08590 195 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 GPM6BQ13491 265 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 CNKSR3Q6P9H4 555 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 SDR42E1Q8WUS8 393 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
SNRPF-203ENST00000551316 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
SNRPF-203ENST00000551316 H3BNC9 293 aa16.33■□□□□ 0.2
SNRPF-203ENST00000551316 CXCL10P02778 98 aa16.33■□□□□ 0.2
SNRPF-203ENST00000551316 MBTPS1Q14703 1052 aa16.33■□□□□ 0.2
SNRPF-203ENST00000551316 DGLUCYQ7Z3D6 616 aa16.33■□□□□ 0.2
SNRPF-203ENST00000551316 TMEM105Q8N8V8 129 aa16.33■□□□□ 0.2
SNRPF-203ENST00000551316 RETREG2Q8NC44 543 aa16.33■□□□□ 0.2
SNRPF-203ENST00000551316 SH2D4AQ9H788 454 aa16.33■□□□□ 0.2
SNRPF-203ENST00000551316 ZEB2O60315 1214 aa16.32■□□□□ 0.2
SNRPF-203ENST00000551316 LGR5O75473 907 aa16.32■□□□□ 0.2
SNRPF-203ENST00000551316 HTRA4P83105 476 aaPredicted RBP16.32■□□□□ 0.2
SNRPF-203ENST00000551316 PTPROQ16827 1216 aa16.32■□□□□ 0.2
SNRPF-203ENST00000551316 TRAF7Q6Q0C0 670 aa16.32■□□□□ 0.2
SNRPF-203ENST00000551316 CRBNQ96SW2 442 aa16.32■□□□□ 0.2
SNRPF-203ENST00000551316 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNRPF-203ENST00000551316 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
SNRPF-203ENST00000551316 ANKRD11Q6UB99 2663 aaPredicted RBP16.31■□□□□ 0.2
SNRPF-203ENST00000551316 E9PSI1 815 aa16.31■□□□□ 0.2
SNRPF-203ENST00000551316 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
SNRPF-203ENST00000551316 CBX2Q14781 532 aaPredicted RBP16.31■□□□□ 0.2
SNRPF-203ENST00000551316 LRRC8DQ7L1W4 858 aa16.31■□□□□ 0.2
SNRPF-203ENST00000551316 WNT8BQ93098 351 aa16.31■□□□□ 0.2
SNRPF-203ENST00000551316 NKD2Q969F2 451 aaPredicted RBP16.31■□□□□ 0.2
SNRPF-203ENST00000551316 SETXQ7Z333 2677 aaKnown RBP16.31■□□□□ 0.2
SNRPF-203ENST00000551316 BFSP2Q13515 415 aa16.3■□□□□ 0.2
SNRPF-203ENST00000551316 COL9A2Q14055 689 aaPredicted RBP16.3■□□□□ 0.2
SNRPF-203ENST00000551316 MSLNLQ96KJ4 702 aa16.3■□□□□ 0.2
SNRPF-203ENST00000551316 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
SNRPF-203ENST00000551316 IRF2BPLQ9H1B7 796 aa16.3■□□□□ 0.2
SNRPF-203ENST00000551316 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
SNRPF-203ENST00000551316 DCP1AQ9NPI6 582 aaPredicted RBP16.3■□□□□ 0.2
SNRPF-203ENST00000551316 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
SNRPF-203ENST00000551316 CD207Q9UJ71 328 aa16.3■□□□□ 0.2
SNRPF-203ENST00000551316 PNMA6EA0A0J9YXQ4 647 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 LINC00271P0C7V0 271 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 MTX1Q13505 466 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 TNNI3KQ59H18 835 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 GDF6Q6KF10 455 aaPredicted RBP16.29■□□□□ 0.2
SNRPF-203ENST00000551316 FBXO11Q86XK2 927 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 LCORLQ8N3X6 602 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 INCENPQ9NQS7 918 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 Q9Y3F1 56 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 FPGT-TNNI3KV9GXZ4 949 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 OTOGLQ3ZCN5 2332 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
SNRPF-203ENST00000551316 GRM6O15303 877 aa16.28■□□□□ 0.2
SNRPF-203ENST00000551316 NDUFB10O96000 172 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms