RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 VTA1Q9NP79 307 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 COG5Q9UP83 839 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 SIP14410 1827 aa13.67□□□□□ -0.22
TMEM258-208ENST00000545210 M0R2C6 588 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
TMEM258-208ENST00000545210 TLL1O43897 1013 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 ACTN1P12814 892 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 PURAQ00577 322 aaKnown RBP13.66□□□□□ -0.22
TMEM258-208ENST00000545210 TFAP4Q01664 338 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 TAP1Q03518 808 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 KCTD1Q719H9 257 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 KBTBD3Q8NAB2 608 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 SLC9A7Q96T83 725 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
TMEM258-208ENST00000545210 MYL3P08590 195 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 MS4A1P11836 297 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 GNAT2P19087 354 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 PDE4BQ07343 736 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 FAM47CQ5HY64 1035 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 TMEM31Q5JXX7 168 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 IFNL3Q8IZI9 196 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.22
TMEM258-208ENST00000545210 HLA-CQ95604 372 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 CCPG1Q9ULG6 757 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 PRR12Q9ULL5 1215 aa13.65□□□□□ -0.22
TMEM258-208ENST00000545210 ARIH1Q9Y4X5 557 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-208ENST00000545210 PATL2C9JE40 543 aaKnown RBP13.64□□□□□ -0.23
TMEM258-208ENST00000545210 CPT1AP50416 773 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 NBPF20Q3BBV1 942 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 RCSD1Q6JBY9 416 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 SPRED2Q7Z698 418 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 MORC4Q8TE76 937 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 FTOQ9C0B1 505 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM258-208ENST00000545210 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-208ENST00000545210 STX8Q9UNK0 236 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
TMEM258-208ENST00000545210 MYH7BA7E2Y1 1941 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 FAM86C2PA6NEL3 165 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 NMT2O60551 498 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 PLA2G6O60733 806 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 IQCF3P0C7M6 154 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 RFC2P35250 354 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 ALDH5A1P51649 535 aaPredicted RBP13.63□□□□□ -0.23
TMEM258-208ENST00000545210 GRB10Q13322 594 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 BAATQ14032 418 aaPredicted RBP13.63□□□□□ -0.23
TMEM258-208ENST00000545210 MIER1Q8N108 512 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 RETREG2Q8NC44 543 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 MTG1Q9BT17 334 aaPredicted RBP13.63□□□□□ -0.23
TMEM258-208ENST00000545210 C11orf16Q9NQ32 467 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 BRWD1Q9NSI6 2320 aa13.63□□□□□ -0.23
TMEM258-208ENST00000545210 KIF28PB7ZC32 967 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 LPXNO60711 386 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 ICAM1P05362 532 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 ZFYP08048 801 aaPredicted RBP13.62□□□□□ -0.23
TMEM258-208ENST00000545210 SLC3A2P08195 630 aaKnown RBP13.62□□□□□ -0.23
TMEM258-208ENST00000545210 PPARAQ07869 468 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 OR6J1Q8NGC5 347 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 SEC62Q99442 399 aaKnown RBP13.62□□□□□ -0.23
TMEM258-208ENST00000545210 NACAP1Q9BZK3 213 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 IL17RBQ9NRM6 502 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 ADD3Q9UEY8 706 aaKnown RBP13.62□□□□□ -0.23
TMEM258-208ENST00000545210 MYH6P13533 1939 aa13.62□□□□□ -0.23
TMEM258-208ENST00000545210 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 NFIBO00712 420 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 GPR37L1O60883 481 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 NFRKBQ6P4R8 1299 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 TMCO2Q7Z6W1 182 aaPredicted RBP13.61□□□□□ -0.23
TMEM258-208ENST00000545210 NAPBQ9H115 298 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 CD320Q9NPF0 282 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 INCENPQ9NQS7 918 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 RAD50Q92878 1312 aa13.61□□□□□ -0.23
TMEM258-208ENST00000545210 WDFY4Q6ZS81 3184 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 RBM47A0AV96 593 aaKnown RBP13.6□□□□□ -0.23
TMEM258-208ENST00000545210 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 TSPY2A6NKD2 308 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 SLC16A2P36021 539 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 KCNJ6P48051 423 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 BFSP2Q13515 415 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 CCDC96Q2M329 555 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 BRDTQ58F21 947 aaPredicted RBP13.6□□□□□ -0.23
TMEM258-208ENST00000545210 PPP4R3BQ5MIZ7 849 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 SLC30A10Q6XR72 485 aa13.6□□□□□ -0.23
TMEM258-208ENST00000545210 GDPD5Q8WTR4 605 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms