RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PDRG1Q9NUG6 133 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 PCDHA1Q9Y5I3 950 aa22.16■■□□□ 1.14
DDX55-211ENST00000544429 LOC102724159A0A0B4J2E5 919 aa22.15■■□□□ 1.14
DDX55-211ENST00000544429 SNAI1O95863 264 aaPredicted RBP22.15■■□□□ 1.14
DDX55-211ENST00000544429 METAP2P50579 478 aaKnown RBP eCLIP22.15■■□□□ 1.14
DDX55-211ENST00000544429 PWP2Q15269 919 aaKnown RBP22.15■■□□□ 1.14
DDX55-211ENST00000544429 TBC1D5Q92609 795 aa22.15■■□□□ 1.14
DDX55-211ENST00000544429 SHISA4Q96DD7 197 aa22.15■■□□□ 1.14
DDX55-211ENST00000544429 PURBQ96QR8 312 aaKnown RBP22.15■■□□□ 1.14
DDX55-211ENST00000544429 CAPN2P17655 700 aa22.14■■□□□ 1.13
DDX55-211ENST00000544429 ADD1P35611 737 aaKnown RBP22.14■■□□□ 1.13
DDX55-211ENST00000544429 HSD17B4P51659 736 aa22.14■■□□□ 1.13
DDX55-211ENST00000544429 NTRK3Q16288 839 aa22.14■■□□□ 1.13
DDX55-211ENST00000544429 LHX8Q68G74 356 aa22.14■■□□□ 1.13
DDX55-211ENST00000544429 MCF2L2Q86YR7 1114 aa22.14■■□□□ 1.13
DDX55-211ENST00000544429 SAMD3Q8N6K7 520 aa22.14■■□□□ 1.13
DDX55-211ENST00000544429 KATNBL1Q9H079 304 aa22.14■■□□□ 1.13
DDX55-211ENST00000544429 CCDC196A0A1B0GTZ2 297 aa22.13■■□□□ 1.13
DDX55-211ENST00000544429 PTPDC1A2A3K4 754 aa22.13■■□□□ 1.13
DDX55-211ENST00000544429 SGPL1O95470 568 aa22.13■■□□□ 1.13
DDX55-211ENST00000544429 ZNF865P0CJ78 1059 aaPredicted RBP22.13■■□□□ 1.13
DDX55-211ENST00000544429 U2AF1L4Q8WU68 220 aaKnown RBP22.13■■□□□ 1.13
DDX55-211ENST00000544429 MAP3K20Q9NYL2 800 aaKnown RBP22.13■■□□□ 1.13
DDX55-211ENST00000544429 COL20A1Q9P218 1284 aa22.13■■□□□ 1.13
DDX55-211ENST00000544429 CAPN15O75808 1086 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 EN2P19622 333 aaPredicted RBP22.12■■□□□ 1.13
DDX55-211ENST00000544429 EDNRBP24530 442 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 PRAMEF19Q5SWL8 479 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 ARMCX2Q7L311 632 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 CCDC82Q8N4S0 544 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 DNERQ8NFT8 737 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 SYTL5Q8TDW5 730 aaPredicted RBP22.12■■□□□ 1.13
DDX55-211ENST00000544429 DEFB118Q96PH6 123 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
DDX55-211ENST00000544429 SEC63Q9UGP8 760 aaKnown RBP22.12■■□□□ 1.13
DDX55-211ENST00000544429 ASB14A6NK59 587 aa22.11■■□□□ 1.13
DDX55-211ENST00000544429 CALML3P27482 149 aa22.11■■□□□ 1.13
DDX55-211ENST00000544429 ALDH5A1P51649 535 aaPredicted RBP22.11■■□□□ 1.13
DDX55-211ENST00000544429 UBE2Q1Q7Z7E8 422 aa22.11■■□□□ 1.13
DDX55-211ENST00000544429 PIBF1Q8WXW3 757 aa22.11■■□□□ 1.13
DDX55-211ENST00000544429 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.11■■□□□ 1.13
DDX55-211ENST00000544429 ADD3Q9UEY8 706 aaKnown RBP22.11■■□□□ 1.13
DDX55-211ENST00000544429 hCG_1642624A0A1W2PR95 340 aa22.1■■□□□ 1.13
DDX55-211ENST00000544429 SEPT4O43236 478 aa22.1■■□□□ 1.13
DDX55-211ENST00000544429 AK2P54819 239 aa22.1■■□□□ 1.13
DDX55-211ENST00000544429 LARP6Q9BRS8 491 aaKnown RBP22.1■■□□□ 1.13
DDX55-211ENST00000544429 ABHD16BQ9H3Z7 469 aa22.1■■□□□ 1.13
DDX55-211ENST00000544429 DDX20Q9UHI6 824 aaKnown RBP22.1■■□□□ 1.13
DDX55-211ENST00000544429 OGDHLQ9ULD0 1010 aa22.1■■□□□ 1.13
DDX55-211ENST00000544429 TPCN1Q9ULQ1 816 aa22.1■■□□□ 1.13
DDX55-211ENST00000544429 NAP1L2Q9ULW6 460 aaPredicted RBP22.1■■□□□ 1.13
DDX55-211ENST00000544429 MSCO60682 206 aa22.09■■□□□ 1.13
DDX55-211ENST00000544429 IFNAR1P17181 557 aa22.09■■□□□ 1.13
DDX55-211ENST00000544429 NEK4P51957 841 aa22.09■■□□□ 1.13
DDX55-211ENST00000544429 ANKRD1Q15327 319 aa22.09■■□□□ 1.13
DDX55-211ENST00000544429 NCOA5Q9HCD5 579 aaKnown RBP22.09■■□□□ 1.13
DDX55-211ENST00000544429 V9GY48 417 aaPredicted RBP22.09■■□□□ 1.13
DDX55-211ENST00000544429 PIK3CDO00329 1044 aa22.08■■□□□ 1.13
DDX55-211ENST00000544429 CFBP00751 764 aa22.08■■□□□ 1.13
DDX55-211ENST00000544429 MNX1P50219 401 aaPredicted RBP22.08■■□□□ 1.13
DDX55-211ENST00000544429 CCT2P78371 535 aaKnown RBP22.08■■□□□ 1.13
DDX55-211ENST00000544429 ACVR2BQ13705 512 aa22.08■■□□□ 1.13
DDX55-211ENST00000544429 WWC2Q6AWC2 1192 aa22.08■■□□□ 1.13
DDX55-211ENST00000544429 TAAR1Q96RJ0 339 aa22.08■■□□□ 1.13
DDX55-211ENST00000544429 BACH2Q9BYV9 841 aa22.08■■□□□ 1.13
DDX55-211ENST00000544429 CNPY2Q9Y2B0 182 aa22.08■■□□□ 1.13
DDX55-211ENST00000544429 DDX49Q9Y6V7 483 aaKnown RBP22.08■■□□□ 1.13
DDX55-211ENST00000544429 hCG_1984214I3L0E3 225 aa22.07■■□□□ 1.12
DDX55-211ENST00000544429 PRPF3O43395 683 aaKnown RBP22.07■■□□□ 1.12
DDX55-211ENST00000544429 PFKFB2O60825 505 aa22.07■■□□□ 1.12
DDX55-211ENST00000544429 PKN1Q16512 942 aa22.07■■□□□ 1.12
DDX55-211ENST00000544429 PFKFB3Q16875 520 aaPredicted RBP22.07■■□□□ 1.12
DDX55-211ENST00000544429 TYW1BQ6NUM6 668 aa22.07■■□□□ 1.12
DDX55-211ENST00000544429 ZNF713Q8N859 430 aaPredicted RBP22.07■■□□□ 1.12
DDX55-211ENST00000544429 RNF26Q9BY78 433 aaPredicted RBP22.07■■□□□ 1.12
DDX55-211ENST00000544429 KIAA1217Q5T5P2 1943 aa22.07■■□□□ 1.12
DDX55-211ENST00000544429 MEIS2O14770 477 aa22.06■■□□□ 1.12
DDX55-211ENST00000544429 TEX2Q8IWB9 1127 aa22.06■■□□□ 1.12
DDX55-211ENST00000544429 ANKLE1Q8NAG6 615 aa22.06■■□□□ 1.12
DDX55-211ENST00000544429 TBC1D32Q96NH3 1257 aa22.06■■□□□ 1.12
DDX55-211ENST00000544429 RBM27Q9P2N5 1060 aaKnown RBP22.06■■□□□ 1.12
DDX55-211ENST00000544429 FRMPD4Q14CM0 1322 aa22.06■■□□□ 1.12
DDX55-211ENST00000544429 GCOM1H8Y6P7 765 aaPredicted RBP22.05■■□□□ 1.12
DDX55-211ENST00000544429 STXBP3O00186 592 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 ADCY6O43306 1168 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 POLR2MP0CAP2 368 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 CNGA1P29973 690 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 HOXA13P31271 388 aaPredicted RBP22.05■■□□□ 1.12
DDX55-211ENST00000544429 SCRN1Q12765 414 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 TAPT1Q6NXT6 567 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 PPP1R18Q6NYC8 613 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 HEATR3Q7Z4Q2 680 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 NSUN6Q8TEA1 469 aaKnown RBP22.05■■□□□ 1.12
DDX55-211ENST00000544429 GPKOWQ92917 476 aaPredicted RBP eCLIP22.05■■□□□ 1.12
DDX55-211ENST00000544429 IWS1Q96ST2 819 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 RMDN3Q96TC7 470 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 VTA1Q9NP79 307 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 PXMP2Q9NR77 195 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 BARHL2Q9NY43 387 aa22.05■■□□□ 1.12
DDX55-211ENST00000544429 TNRC18O15417 2968 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms