RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FCHSD1Q86WN1 690 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 RASSF4Q9H2L5 321 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
DDX55-209ENST00000542286 ADRA2BP18089 450 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 PPP2R3AQ06190 1150 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 COL23A1Q86Y22 540 aaPredicted RBP16.54■□□□□ 0.24
DDX55-209ENST00000542286 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 ZNF622Q969S3 477 aaKnown RBP eCLIP16.54■□□□□ 0.245e-7■■□□□ 12.5
DDX55-209ENST00000542286 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 RMND1Q9NWS8 449 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 TUBB4AP04350 444 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 HOXA10P31260 410 aaPredicted RBP16.54■□□□□ 0.24
DDX55-209ENST00000542286 SHMT1P34896 483 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 MAP3K9P80192 1104 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 GPS2Q13227 327 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 ECM1Q16610 540 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 ZSCAN26Q16670 478 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 KRT25Q7Z3Z0 450 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 SLC35F6Q8N357 371 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 UBXN6Q9BZV1 441 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 CCSER1Q9C0I3 900 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 JMJD4Q9H9V9 463 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 TRPC5Q9UL62 973 aaPredicted RBP16.54■□□□□ 0.24
DDX55-209ENST00000542286 MRFAP1Q9Y605 127 aa16.54■□□□□ 0.24
DDX55-209ENST00000542286 G3V3G9 751 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 PLCG2P16885 1265 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 OAS2P29728 719 aaKnown RBP16.53■□□□□ 0.24
DDX55-209ENST00000542286 CACNB1Q02641 598 aaPredicted RBP16.53■□□□□ 0.24
DDX55-209ENST00000542286 GABPAQ06546 454 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 TTI2Q6NXR4 508 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 KIAA0895Q8NCT3 520 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
DDX55-209ENST00000542286 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 SPATA31A6Q5VVP1 1343 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 SASH3O75995 380 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 GNA11P29992 359 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.244e-6■■□□□ 12.4
DDX55-209ENST00000542286 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 GRB10Q13322 594 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 DNAJC18Q9H819 358 aa16.53■□□□□ 0.24
DDX55-209ENST00000542286 REXO2Q9Y3B8 237 aaKnown RBP16.53■□□□□ 0.24
DDX55-209ENST00000542286 MYMKA6NI61 221 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 LRRC10BA6NIK2 292 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 TRIM66O15016 1216 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 IDEP14735 1019 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
DDX55-209ENST00000542286 CALCRLQ16602 461 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 C10orf67Q8IYJ2 551 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.24
DDX55-209ENST00000542286 PNMA5Q96PV4 448 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.24
DDX55-209ENST00000542286 ATP8B1O43520 1251 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 RHOBTB3O94955 611 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 SRGNP10124 158 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.23
DDX55-209ENST00000542286 CNGA4Q8IV77 575 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 MB21D1Q8N884 522 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 TBC1D22AQ8WUA7 517 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 POLD4Q9HCU8 107 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 BLOC1S4Q9NUP1 217 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 EXOC1Q9NV70 894 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 TBC1D7Q9P0N9 293 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 LCMT1Q9UIC8 334 aa16.52■□□□□ 0.23
DDX55-209ENST00000542286 MYO1CO00159 1063 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 ENC1O14682 589 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 TBC1D8O95759 1140 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 MMP10P09238 476 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 ADCY7P51828 1080 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 SMC1AQ14683 1233 aaKnown RBP16.51■□□□□ 0.23
DDX55-209ENST00000542286 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 SP8Q8IXZ3 490 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
DDX55-209ENST00000542286 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
DDX55-209ENST00000542286 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 KANSL2Q9H9L4 492 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
DDX55-209ENST00000542286 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 PSMA7O14818 248 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
DDX55-209ENST00000542286 GDF11O95390 407 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 SSBP05455 408 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX55-209ENST00000542286 TMED8Q6PL24 325 aaPredicted RBP16.51■□□□□ 0.23
DDX55-209ENST00000542286 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
DDX55-209ENST00000542286 SEMA6BQ9H3T3 888 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms