RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 SLC4A7Q9Y6M7 1214 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 REV3LO60673 3130 aa15.48■□□□□ 0.07
SCARB1-207ENST00000541661 ORC4O43929 436 aa15.47■□□□□ 0.07
SCARB1-207ENST00000541661 PFKMP08237 780 aa15.47■□□□□ 0.07
SCARB1-207ENST00000541661 SUPT20HL2P0C7V6 817 aa15.47■□□□□ 0.07
SCARB1-207ENST00000541661 IGFBP4P22692 258 aa15.47■□□□□ 0.07
SCARB1-207ENST00000541661 BAATQ14032 418 aaPredicted RBP15.47■□□□□ 0.07
SCARB1-207ENST00000541661 ALX1Q15699 326 aa15.47■□□□□ 0.07
SCARB1-207ENST00000541661 RASGRP2Q7LDG7 609 aa15.47■□□□□ 0.07
SCARB1-207ENST00000541661 OTUD7AQ8TE49 926 aaPredicted RBP15.47■□□□□ 0.07
SCARB1-207ENST00000541661 PURBQ96QR8 312 aaKnown RBP15.47■□□□□ 0.07
SCARB1-207ENST00000541661 TRANK1O15050 2925 aa15.47■□□□□ 0.07
SCARB1-207ENST00000541661 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
SCARB1-207ENST00000541661 ALDH5A1P51649 535 aaPredicted RBP15.46■□□□□ 0.07
SCARB1-207ENST00000541661 PURAQ00577 322 aaKnown RBP15.46■□□□□ 0.07
SCARB1-207ENST00000541661 CCDC85BQ15834 202 aaPredicted RBP15.46■□□□□ 0.07
SCARB1-207ENST00000541661 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.07
SCARB1-207ENST00000541661 SCLYQ96I15 445 aa15.46■□□□□ 0.07
SCARB1-207ENST00000541661 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
SCARB1-207ENST00000541661 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
SCARB1-207ENST00000541661 XIRP2A4UGR9 3374 aa15.46■□□□□ 0.07
SCARB1-207ENST00000541661 SCN10AQ9Y5Y9 1956 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 SALL3Q9BXA9 1300 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 MX1P20591 662 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 CPT1AP50416 773 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 RABGGTBP53611 331 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 CCDC96Q2M329 555 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 VPS53Q5VIR6 699 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 SYDE2Q5VT97 1194 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 ADAMTS19Q8TE59 1207 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 TCP11L1Q9NUJ3 509 aa15.45■□□□□ 0.06
SCARB1-207ENST00000541661 SCN5AQ14524 2016 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 TNKSO95271 1327 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 NFIBO00712 420 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 TOP1P11387 765 aaKnown RBP15.44■□□□□ 0.06
SCARB1-207ENST00000541661 ATP2A2P16615 1042 aaKnown RBP15.44■□□□□ 0.06
SCARB1-207ENST00000541661 POU3F3P20264 500 aaPredicted RBP15.44■□□□□ 0.06
SCARB1-207ENST00000541661 COL9A1P20849 921 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 SLC16A2P36021 539 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 PPP2R2DQ66LE6 453 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 CLEC4DQ8WXI8 215 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 TMEM47Q9BQJ4 181 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 MTG1Q9BT17 334 aaPredicted RBP15.44■□□□□ 0.06
SCARB1-207ENST00000541661 TSPYL2Q9H2G4 693 aaPredicted RBP15.44■□□□□ 0.06
SCARB1-207ENST00000541661 HELLSQ9NRZ9 838 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 TRMT13Q9NUP7 481 aaKnown RBP15.44■□□□□ 0.06
SCARB1-207ENST00000541661 PNMA2Q9UL42 364 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 MTMR7Q9Y216 660 aa15.44■□□□□ 0.06
SCARB1-207ENST00000541661 ZBBXA8MT70 800 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 NKRFO15226 690 aaKnown RBP eCLIP15.43■□□□□ 0.065e-7■□□□□ 9.1
SCARB1-207ENST00000541661 CYP2C9P11712 490 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 MYOGP15173 224 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 EDNRBP24530 442 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 RFC2P35250 354 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 TTLL4Q14679 1199 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 TICAM2Q86XR7 235 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 UHRF1Q96T88 793 aaPredicted RBP15.43■□□□□ 0.06
SCARB1-207ENST00000541661 BDP1A6H8Y1 2624 aa15.43■□□□□ 0.06
SCARB1-207ENST00000541661 NCOR1O75376 2440 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 PTPDC1A2A3K4 754 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 A6NJR5 290 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 KPNA6O60684 536 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 FGAP02671 866 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 MYL3P08590 195 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 PTPN11Q06124 597 aaPredicted RBP15.42■□□□□ 0.06
SCARB1-207ENST00000541661 NBPF20Q3BBV1 942 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 TMEM67Q5HYA8 995 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 NFRKBQ6P4R8 1299 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 SLC30A10Q6XR72 485 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 DNERQ8NFT8 737 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 OR6J1Q8NGC5 347 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 EVI5LQ96CN4 794 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 GPCPD1Q9NPB8 672 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 GPHNQ9NQX3 736 aaPredicted RBP15.42■□□□□ 0.06
SCARB1-207ENST00000541661 TANC1Q9C0D5 1861 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 WDR19Q8NEZ3 1342 aa15.42■□□□□ 0.06
SCARB1-207ENST00000541661 SNHG28P0DPA3 235 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 PDHBP11177 359 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 ACTN1P12814 892 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 BMP1P13497 986 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 PDE4DQ08499 809 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 BRDTQ58F21 947 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-207ENST00000541661 RNF207Q6ZRF8 634 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 DEFB128Q7Z7B8 93 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 PHOSPHO2Q8TCD6 241 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 SCFD2Q8WU76 684 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 TTC14Q96N46 770 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 MPHOSPH6Q99547 160 aaKnown RBP15.41■□□□□ 0.06
SCARB1-207ENST00000541661 ZMYM6O95789 1325 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-207ENST00000541661 RAD50Q92878 1312 aa15.41■□□□□ 0.06
SCARB1-207ENST00000541661 IQCF3P0C7M6 154 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 CALML3P27482 149 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 RPS6P62753 249 aaKnown RBP15.4■□□□□ 0.06
SCARB1-207ENST00000541661 ZNF543Q08ER8 600 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 PPP2R5BQ15173 497 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 RGS22Q8NE09 1264 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 IL27Q8NEV9 243 aa15.4■□□□□ 0.06
SCARB1-207ENST00000541661 SLC9A7Q96T83 725 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms