RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 NUDT19A8MXV4 375 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 RFXAPO00287 272 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 SRGAP3O43295 1099 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 VAMP4O75379 141 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 PPM1BO75688 479 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 MAPKAPK2P49137 400 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 GRB10Q13322 594 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 EEF1DP3Q658K8 133 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 ADAT2Q7Z6V5 191 aaKnown RBP6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 PANK1Q8TE04 598 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 CGGBP1Q9UFW8 167 aaPredicted RBP6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 PCDHA5Q9Y5H7 936 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 IRAK3Q9Y616 596 aa6.72□□□□□ -1.33
SOX9-AS1-214ENST00000540802 L1CAMP32004 1257 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 KIAA1211LQ6NV74 962 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 VHLLQ6RSH7 139 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TMC6Q7Z403 805 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 IGDCC3Q8IVU1 814 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TMEM151BQ8IW70 566 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TMEFF1Q8IYR6 380 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CCSER2Q9H7U1 834 aa6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 AQRO60306 1485 aaKnown RBP eCLIP6.71□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CYBBP04839 570 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 DBHP09172 617 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 PI3P19957 117 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 PLEKHN1Q494U1 663 aaPredicted RBP6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TCERG1LQ5VWI1 586 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 PAQR3Q6TCH7 311 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CHD1O14646 1710 aa6.7□□□□□ -1.34
SOX9-AS1-214ENST00000540802 MAGI1Q96QZ7 1491 aaPredicted RBP6.69□□□□□ -1.34
SOX9-AS1-214ENST00000540802 C2orf71A6NGG8 1288 aa6.69□□□□□ -1.34
SOX9-AS1-214ENST00000540802 AMPD2Q01433 879 aa6.69□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ZC3H14Q6PJT7 736 aaKnown RBP6.69□□□□□ -1.34
SOX9-AS1-214ENST00000540802 FAM129CQ86XR2 697 aa6.69□□□□□ -1.34
SOX9-AS1-214ENST00000540802 APEX2Q9UBZ4 518 aa6.69□□□□□ -1.34
SOX9-AS1-214ENST00000540802 BACE2Q9Y5Z0 518 aa6.69□□□□□ -1.34
SOX9-AS1-214ENST00000540802 GRIN2BQ13224 1484 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 GAPVD1Q14C86 1478 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ERICH3Q5RHP9 1530 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 STXBP3O00186 592 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 PPP1R11O60927 126 aaPredicted RBP6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 FBLN1P23142 703 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 IGFBP6P24592 240 aaPredicted RBP6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ZNF143P52747 638 aaPredicted RBP6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 DPY19L1Q2PZI1 675 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 BICRALQ6AI39 1079 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ANAPC16Q96DE5 110 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 APBA2Q99767 749 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 EMC9Q9Y3B6 208 aa6.68□□□□□ -1.34
SOX9-AS1-214ENST00000540802 A0A1W2PQJ5 194 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 INHBBP09529 407 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 GLI4P10075 376 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 SEPHS1P49903 392 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 NCAPHQ15003 741 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CNKSR3Q6P9H4 555 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 LILRA6Q6PI73 481 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 KCNC2Q96PR1 638 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 PARD6AQ9NPB6 346 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 AKT3Q9Y243 479 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 SUGT1Q9Y2Z0 365 aa6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TDRD9Q8NDG6 1382 aaKnown RBP6.67□□□□□ -1.34
SOX9-AS1-214ENST00000540802 SNAPC4Q5SXM2 1469 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ADAMTS12P58397 1594 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 BUB1BO60566 1050 aaPredicted RBP6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ERCC5P28715 1186 aaPredicted RBP6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 AFF3P51826 1226 aaKnown RBP6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 NCKAP1LP55160 1127 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 BVESQ8NE79 360 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 COPS5Q92905 334 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CAPN10Q9HC96 672 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 HCFC2Q9Y5Z7 792 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TRBV23OR9-2A0A075B6M9 112 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 F8W031 263 aaPredicted RBP6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TRIM13O60858 407 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 BMP7P18075 431 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 PAMP19021 973 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 HOXA5P20719 270 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TACR1P25103 407 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 PRR5P85299 388 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 ZNF200P98182 395 aaPredicted RBP6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CAP1Q01518 475 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 TARBP2Q15633 366 aaKnown RBP6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 MRGPRX3Q96LB0 322 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 C20orf173Q96LM9 149 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 MTA3Q9BTC8 594 aa6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CCDC9Q9Y3X0 531 aaKnown RBP6.65□□□□□ -1.34
SOX9-AS1-214ENST00000540802 CLASP1Q7Z460 1538 aa6.65□□□□□ -1.35
SOX9-AS1-214ENST00000540802 NPHP3-ACAD11A0A0J9YXS1 232 aa6.64□□□□□ -1.35
SOX9-AS1-214ENST00000540802 ZC3H12DA2A288 527 aaKnown RBP6.64□□□□□ -1.35
SOX9-AS1-214ENST00000540802 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
SOX9-AS1-214ENST00000540802 NAT2P11245 290 aa6.64□□□□□ -1.35
SOX9-AS1-214ENST00000540802 TCF3P15923 654 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms