RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 LRRFIP1Q32MZ4 808 aaKnown RBP14.77□□□□□ -0.05
CAPN1-223ENST00000533079 NFRKBQ6P4R8 1299 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 KIAA1211Q6ZU35 1233 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 DEFB128Q7Z7B8 93 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 APPBP2Q92624 585 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 MTG1Q9BT17 334 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-223ENST00000533079 GPHNQ9NQX3 736 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-223ENST00000533079 PDGFCQ9NRA1 345 aa14.77□□□□□ -0.05
CAPN1-223ENST00000533079 PRR33A8MZF0 331 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 PI4K2BG5E9Z4 385 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 RFXAPO00287 272 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 NKRFO15226 690 aaKnown RBP eCLIP14.76□□□□□ -0.05
CAPN1-223ENST00000533079 KPNA6O60684 536 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 ZFYP08048 801 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-223ENST00000533079 CYP2C9P11712 490 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 PDE4BQ07343 736 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 GRB10Q13322 594 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 BFSP2Q13515 415 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 STK11IPQ8N1F8 1099 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 KBTBD3Q8NAB2 608 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 RETREG2Q8NC44 543 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 NEDD1Q8NHV4 660 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 CERS4Q9HA82 394 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 EPB41L4AQ9HCS5 686 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-223ENST00000533079 C11orf16Q9NQ32 467 aa14.76□□□□□ -0.05
CAPN1-223ENST00000533079 ISY1Q9ULR0 285 aaKnown RBP14.76□□□□□ -0.05
CAPN1-223ENST00000533079 RBM47A0AV96 593 aaKnown RBP14.75□□□□□ -0.05
CAPN1-223ENST00000533079 GPAA1O43292 621 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 SLC3A2P08195 630 aaKnown RBP14.75□□□□□ -0.05
CAPN1-223ENST00000533079 IQCF3P0C7M6 154 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 KCNJ6P48051 423 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 EEPD1Q7L9B9 569 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 CCDC155Q8N6L0 562 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 MPHOSPH6Q99547 160 aaKnown RBP14.75□□□□□ -0.05
CAPN1-223ENST00000533079 WDR11Q9BZH6 1224 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 CHMP4BQ9H444 224 aaKnown RBP14.75□□□□□ -0.05
CAPN1-223ENST00000533079 DDX19BQ9UMR2 479 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 SCN5AQ14524 2016 aa14.75□□□□□ -0.05
CAPN1-223ENST00000533079 SCN10AQ9Y5Y9 1956 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 PRDM1O75626 825 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 PARNO95453 639 aaKnown RBP14.74□□□□□ -0.05
CAPN1-223ENST00000533079 ICAM1P05362 532 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 PTGS1P23219 599 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 ALDH5A1P51649 535 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-223ENST00000533079 FAM47CQ5HY64 1035 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 KRT40Q6A162 431 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 OR6J1Q8NGC5 347 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 CAGE1Q8TC20 777 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 PANK1Q8TE04 598 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 OSBP2Q969R2 916 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 NACAP1Q9BZK3 213 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 LRRCC1Q9C099 1032 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 FTOQ9C0B1 505 aaKnown RBP eCLIP14.74□□□□□ -0.05
CAPN1-223ENST00000533079 CCPG1Q9ULG6 757 aa14.74□□□□□ -0.05
CAPN1-223ENST00000533079 LPXNO60711 386 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 MYL3P08590 195 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 MUM1L1Q5H9M0 696 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 NSMFQ6X4W1 530 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 AFAP1L1Q8TED9 768 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 ZBTB40Q9NUA8 1239 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 PNMA2Q9UL42 364 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 PRR12Q9ULL5 1215 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 NOD1Q9Y239 953 aa14.73□□□□□ -0.05
CAPN1-223ENST00000533079 PTPRSQ13332 1948 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 A6NJR5 290 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 RNF113AO15541 343 aaKnown RBP14.72□□□□□ -0.05
CAPN1-223ENST00000533079 ARHGEF15O94989 841 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 APPP05067 770 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 TFAP4Q01664 338 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 NBPF20Q3BBV1 942 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 TMEM63BQ5T3F8 832 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 RCSD1Q6JBY9 416 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 KHSRPQ92945 711 aaKnown RBP eCLIP14.72□□□□□ -0.05
CAPN1-223ENST00000533079 GPATCH3Q96I76 525 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 BCL11AQ9H165 835 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 KCNH6Q9H252 994 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 RANBP17Q9H2T7 1088 aaKnown RBP14.72□□□□□ -0.05
CAPN1-223ENST00000533079 ECHDC1Q9NTX5 307 aa14.72□□□□□ -0.05
CAPN1-223ENST00000533079 PRRC2BQ5JSZ5 2229 aaKnown RBP14.72□□□□□ -0.05
CAPN1-223ENST00000533079 SIP14410 1827 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 FAM86C2PA6NEL3 165 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 PATL2C9JE40 543 aaKnown RBP14.71□□□□□ -0.05
CAPN1-223ENST00000533079 EFCAB14O75071 495 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 MCCP23508 829 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 WDR5P61964 334 aaKnown RBP14.71□□□□□ -0.05
CAPN1-223ENST00000533079 KCTD1Q719H9 257 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 IFNL3Q8IZI9 196 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 SCFD2Q8WU76 684 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 UBE2ZQ9H832 354 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-223ENST00000533079 STX8Q9UNK0 236 aa14.71□□□□□ -0.05
CAPN1-223ENST00000533079 DDX49Q9Y6V7 483 aaKnown RBP14.71□□□□□ -0.05
CAPN1-223ENST00000533079 MYO9BQ13459 2157 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 ALADP13716 330 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 PPARAQ07869 468 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 RBL2Q08999 1139 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 PUS10Q3MIT2 529 aaKnown RBP14.7□□□□□ -0.06
CAPN1-223ENST00000533079 LEXMQ3ZCV2 418 aa14.7□□□□□ -0.06
CAPN1-223ENST00000533079 CNKSR3Q6P9H4 555 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms