RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 ADGRF4Q8IZF3 695 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 RGS22Q8NE09 1264 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 DNERQ8NFT8 737 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 GNEQ9Y223 722 aaKnown RBP12.72□□□□□ -0.37
PVT1-216ENST00000523068 KIAA1217Q5T5P2 1943 aa12.72□□□□□ -0.37
PVT1-216ENST00000523068 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.37
PVT1-216ENST00000523068 TRIM43BA6NCK2 446 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 RAG1P15918 1043 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 RPS6P62753 249 aaKnown RBP12.71□□□□□ -0.37
PVT1-216ENST00000523068 PTH1RQ03431 593 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 PDE4DQ08499 809 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 TAPT1Q6NXT6 567 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 SLC30A10Q6XR72 485 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 EEPD1Q7L9B9 569 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 MCF2L2Q86YR7 1114 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 NCOA7Q8NI08 942 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 BADQ92934 168 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 TRIM43Q96BQ3 446 aaPredicted RBP12.71□□□□□ -0.37
PVT1-216ENST00000523068 LRCH3Q96II8 777 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 PURBQ96QR8 312 aaKnown RBP12.71□□□□□ -0.37
PVT1-216ENST00000523068 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.37
PVT1-216ENST00000523068 E7EWF7 191 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 KIAA0355O15063 1070 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 DYNC1LI2O43237 492 aaPredicted RBP12.7□□□□□ -0.38
PVT1-216ENST00000523068 CABYRO75952 493 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 SMPD1P17405 629 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 FAAP100Q0VG06 881 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 SEC23AQ15436 765 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 FSCN1Q16658 493 aaKnown RBP12.7□□□□□ -0.38
PVT1-216ENST00000523068 DUSP28Q4G0W2 176 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 CYB5R4Q7L1T6 521 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 SH3RF1Q7Z6J0 888 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 MAP4K1Q92918 833 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 SEZ6LQ9BYH1 1024 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 PDGFCQ9NRA1 345 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 MRPL11Q9Y3B7 192 aaKnown RBP12.7□□□□□ -0.38
PVT1-216ENST00000523068 LAMA3Q16787 3333 aa12.7□□□□□ -0.38
PVT1-216ENST00000523068 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 ARVCFO00192 962 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 IFIT3O14879 490 aaKnown RBP12.69□□□□□ -0.38
PVT1-216ENST00000523068 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.388e-7■■□□□ 12.5
PVT1-216ENST00000523068 CTAGE5O15320 804 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 TLR3O15455 904 aaKnown RBP12.69□□□□□ -0.38
PVT1-216ENST00000523068 CDK7P50613 346 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
PVT1-216ENST00000523068 BEX3Q00994 111 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 TRAF1Q13077 416 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 QRICH1Q2TAL8 776 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 CENPQQ7L2Z9 268 aaPredicted RBP12.69□□□□□ -0.38
PVT1-216ENST00000523068 AMNQ9BXJ7 453 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 JMJD4Q9H9V9 463 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 VAT1LQ9HCJ6 419 aa12.69□□□□□ -0.38
PVT1-216ENST00000523068 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
PVT1-216ENST00000523068 PALM3A6NDB9 673 aaPredicted RBP12.68□□□□□ -0.38
PVT1-216ENST00000523068 EDNRBP24530 442 aa12.68□□□□□ -0.38
PVT1-216ENST00000523068 CPT1AP50416 773 aa12.68□□□□□ -0.38
PVT1-216ENST00000523068 WTAPQ15007 396 aa12.68□□□□□ -0.38
PVT1-216ENST00000523068 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
PVT1-216ENST00000523068 BRDTQ58F21 947 aaPredicted RBP12.68□□□□□ -0.38
PVT1-216ENST00000523068 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
PVT1-216ENST00000523068 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
PVT1-216ENST00000523068 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
PVT1-216ENST00000523068 RBM8AQ9Y5S9 174 aaKnown RBP12.68□□□□□ -0.38
PVT1-216ENST00000523068 DDX49Q9Y6V7 483 aaKnown RBP12.68□□□□□ -0.38
PVT1-216ENST00000523068 ZBTB5O15062 677 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 TIMP1P01033 207 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 FPGSQ05932 587 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 GRM4Q14833 912 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 TMEM67Q5HYA8 995 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 CATIPQ7Z7H3 387 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 SAMD3Q8N6K7 520 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 NSUN6Q8TEA1 469 aaKnown RBP12.67□□□□□ -0.38
PVT1-216ENST00000523068 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 POLR3EQ9NVU0 708 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 MAP3K20Q9NYL2 800 aaKnown RBP12.67□□□□□ -0.38
PVT1-216ENST00000523068 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
PVT1-216ENST00000523068 MYH7BA7E2Y1 1941 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 ITGB8P26012 769 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 ITGA7Q13683 1181 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 SHHQ15465 462 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 BMP2KLQ5H9B9 411 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 MFSD5Q6N075 450 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 CASC1Q6TDU7 716 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 FAM126BQ8IXS8 530 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 DEFB123Q8N688 67 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 SLC43A3Q8NBI5 491 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
PVT1-216ENST00000523068 MTMR8Q96EF0 704 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
PVT1-216ENST00000523068 RMDN3Q96TC7 470 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms