RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 USP17L20D6RJB6 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 TERF1P54274 439 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L24Q0WX57 530 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 TMEM266Q2M3C6 531 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 USP17L6PQ6QN14 398 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 ZBTB21Q9ULJ3 1066 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 CTNND2Q9UQB3 1225 aa29.14■■■□□ 2.26
COL13A1-214ENST00000522165 GCFC2P16383 781 aaKnown RBP29.14■■■□□ 2.25
COL13A1-214ENST00000522165 ECE1P42892 770 aa29.14■■■□□ 2.25
COL13A1-214ENST00000522165 IKQ13123 557 aaPredicted RBP29.14■■■□□ 2.25
COL13A1-214ENST00000522165 KCNB1Q14721 858 aa29.14■■■□□ 2.25
COL13A1-214ENST00000522165 CDAN1Q8IWY9 1227 aa29.14■■■□□ 2.25
COL13A1-214ENST00000522165 JDP2Q8WYK2 163 aa29.14■■■□□ 2.25
COL13A1-214ENST00000522165 LRWD1Q9UFC0 647 aa29.14■■■□□ 2.25
COL13A1-214ENST00000522165 KLRC4O43908 158 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 SNAP25P60880 206 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 PDIA5Q14554 519 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 DDX25Q9UHL0 483 aaKnown RBP29.13■■■□□ 2.25
COL13A1-214ENST00000522165 TMX2Q9Y320 296 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 WNT10BO00744 389 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 SFPQP23246 707 aaKnown RBP eCLIP29.13■■■□□ 2.25
COL13A1-214ENST00000522165 SEMA3FQ13275 785 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 CDKAL1Q5VV42 579 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 FBXO11Q86XK2 927 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 ACER1Q8TDN7 264 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 CALML4Q96GE6 196 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 NAP1L4Q99733 375 aaKnown RBP29.13■■■□□ 2.25
COL13A1-214ENST00000522165 PGAP2Q9UHJ9 254 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 RWDD2AQ9UIY3 292 aa29.13■■■□□ 2.25
COL13A1-214ENST00000522165 NBPF9Q3BBW0 867 aa29.12■■■□□ 2.25
COL13A1-214ENST00000522165 SPICE1Q8N0Z3 855 aa29.12■■■□□ 2.25
COL13A1-214ENST00000522165 RAB34Q9BZG1 259 aa29.12■■■□□ 2.25
COL13A1-214ENST00000522165 NFKBIEO00221 500 aa29.11■■■□□ 2.25
COL13A1-214ENST00000522165 MEIS2O14770 477 aa29.11■■■□□ 2.25
COL13A1-214ENST00000522165 KMT5BQ4FZB7 885 aa29.11■■■□□ 2.25
COL13A1-214ENST00000522165 MYOZ2Q9NPC6 264 aa29.11■■■□□ 2.25
COL13A1-214ENST00000522165 GDAQ9Y2T3 454 aa29.11■■■□□ 2.25
COL13A1-214ENST00000522165 PAK1Q13153 545 aa29.11■■■□□ 2.25
COL13A1-214ENST00000522165 ANO3Q9BYT9 981 aa29.11■■■□□ 2.25
COL13A1-214ENST00000522165 AP3B2Q13367 1082 aa29.1■■■□□ 2.25
COL13A1-214ENST00000522165 KIAA1755Q5JYT7 1200 aa29.1■■■□□ 2.25
COL13A1-214ENST00000522165 APTXQ7Z2E3 356 aaKnown RBP29.1■■■□□ 2.25
COL13A1-214ENST00000522165 HAS1Q92839 578 aa29.1■■■□□ 2.25
COL13A1-214ENST00000522165 GOPCQ9HD26 462 aa29.1■■■□□ 2.25
COL13A1-214ENST00000522165 A0A1B0GTH6 734 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 RHOBTB3O94955 611 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 PRCPP42785 496 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 USP11P51784 963 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 GRB10Q13322 594 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 TNIP1Q15025 636 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 MIGA2Q7L4E1 593 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 C7orf25Q9BPX7 421 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 PRR12Q9ULL5 1215 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 SHTN1A0MZ66 631 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 NR1I3Q14994 352 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 NELFBQ8WX92 580 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 TRIM9Q9C026 710 aa29.09■■■□□ 2.25
COL13A1-214ENST00000522165 POTEMA6NI47 508 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 MMP14P50281 582 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 MAP3K10Q02779 954 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 PTPN21Q16825 1174 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 USH1GQ495M9 461 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 MCTP2Q6DN12 878 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 PNMA5Q96PV4 448 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 PPP1R1BQ9UD71 204 aaPredicted RBP29.08■■■□□ 2.25
COL13A1-214ENST00000522165 CAP2P40123 477 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 STAT2P52630 851 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 ADSSL1Q8N142 457 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 STK17AQ9UEE5 414 aa29.08■■■□□ 2.25
COL13A1-214ENST00000522165 AMPD3Q01432 767 aa29.07■■■□□ 2.24
COL13A1-214ENST00000522165 CYP3A7-CYP3A51PA0A087WV96 503 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 CYP3A7P24462 503 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 TBX2Q13207 712 aaPredicted RBP29.06■■■□□ 2.24
COL13A1-214ENST00000522165 TPD52L1Q16890 204 aaPredicted RBP29.06■■■□□ 2.24
COL13A1-214ENST00000522165 GIMAP8Q8ND71 665 aaPredicted RBP29.06■■■□□ 2.24
COL13A1-214ENST00000522165 CRYGNQ8WXF5 182 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 P2RX7Q99572 595 aaKnown RBP29.06■■■□□ 2.24
COL13A1-214ENST00000522165 BLOC1S4Q9NUP1 217 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 COBLO75128 1261 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 ZNF280AP59817 542 aaPredicted RBP29.06■■■□□ 2.24
COL13A1-214ENST00000522165 FAM83BQ5T0W9 1011 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 KRT79Q5XKE5 535 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 MBOAT7Q96N66 472 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 KCND1Q9NSA2 647 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 MAPK8IP1Q9UQF2 711 aa29.06■■■□□ 2.24
COL13A1-214ENST00000522165 SPECC1LQ69YQ0 1117 aa29.05■■■□□ 2.24
COL13A1-214ENST00000522165 MOXD1Q6UVY6 613 aa29.05■■■□□ 2.24
COL13A1-214ENST00000522165 CTAGE1Q96RT6 745 aa29.05■■■□□ 2.24
COL13A1-214ENST00000522165 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.05■■■□□ 2.24
COL13A1-214ENST00000522165 SNX29Q8TEQ0 813 aa29.05■■■□□ 2.24
COL13A1-214ENST00000522165 CDK5RAP3Q96JB5 506 aa29.05■■■□□ 2.24
COL13A1-214ENST00000522165 VCPKMTQ9H867 229 aa29.05■■■□□ 2.24
COL13A1-214ENST00000522165 ADD3Q9UEY8 706 aaKnown RBP29.05■■■□□ 2.24
COL13A1-214ENST00000522165 OPLAHO14841 1288 aa29.04■■■□□ 2.24
COL13A1-214ENST00000522165 NRDCO43847 1150 aa29.04■■■□□ 2.24
COL13A1-214ENST00000522165 MARCH6O60337 910 aa29.04■■■□□ 2.24
COL13A1-214ENST00000522165 RPS12P25398 132 aaKnown RBP29.04■■■□□ 2.24
COL13A1-214ENST00000522165 SV2BQ7L1I2 683 aa29.04■■■□□ 2.24
COL13A1-214ENST00000522165 CCDC47Q96A33 483 aaKnown RBP29.04■■■□□ 2.24
COL13A1-214ENST00000522165 NUDT12Q9BQG2 462 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms