RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 MRPL38Q96DV4 380 aaKnown RBP6.32□□□□□ -1.4
SDC2-206ENST00000521590 CHAMP1Q96JM3 812 aa6.32□□□□□ -1.4
SDC2-206ENST00000521590 RIPOR3Q96MK2 946 aa6.32□□□□□ -1.4
SDC2-206ENST00000521590 MOV10L1Q9BXT6 1211 aaKnown RBP6.32□□□□□ -1.4
SDC2-206ENST00000521590 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
SDC2-206ENST00000521590 TRPV6Q9H1D0 765 aa6.32□□□□□ -1.4
SDC2-206ENST00000521590 PCDHGC5Q9Y5F6 944 aa6.32□□□□□ -1.4
SDC2-206ENST00000521590 LINC01553A4QN01 128 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L15C9J2P7 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L13C9JLJ4 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L11C9JVI0 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L18D6R9N7 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L22D6RA61 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L17D6RBQ6 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L19D6RCP7 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L20D6RJB6 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 CTAGE5O15320 804 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 ADCY6O43306 1168 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 ADRB1P08588 477 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 PLCB2Q00722 1185 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 USP17L24Q0WX57 530 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 PICALMQ13492 652 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 COL9A3Q14050 684 aaPredicted RBP6.31□□□□□ -1.4
SDC2-206ENST00000521590 CAVIN4Q5BKX8 364 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 TCEAL5Q5H9L2 206 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 LMBR1LQ6UX01 489 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 DEFB128Q7Z7B8 93 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 ZSCAN1Q8NBB4 408 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 WDR66Q8TBY9 1149 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 VTI1AQ96AJ9 217 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 C12orf42Q96LP6 360 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 TGS1Q96RS0 853 aaKnown RBP6.31□□□□□ -1.4
SDC2-206ENST00000521590 TINF2Q9BSI4 451 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 LAS1LQ9Y4W2 734 aaKnown RBP6.31□□□□□ -1.4
SDC2-206ENST00000521590 FOCADQ5VW36 1801 aa6.31□□□□□ -1.4
SDC2-206ENST00000521590 DSPP15924 2871 aaKnown RBP6.31□□□□□ -1.4
SDC2-206ENST00000521590 H3BM21 787 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 CAPN5O15484 640 aaPredicted RBP6.3□□□□□ -1.4
SDC2-206ENST00000521590 B4GALT4O60513 344 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 DUSP11O75319 330 aaKnown RBP6.3□□□□□ -1.4
SDC2-206ENST00000521590 ASNSP08243 561 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 ERCC3P19447 782 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 ATXN1P54253 815 aaKnown RBP6.3□□□□□ -1.4
SDC2-206ENST00000521590 RHBDL3P58872 404 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 USP46P62068 366 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 NEXNQ0ZGT2 675 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 CLUL1Q15846 466 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 KIAA0319Q5VV43 1072 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 EP400NLQ6ZTU2 488 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 ABRAQ8N0Z2 381 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 VGLL2Q8N8G2 317 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 PCSK9Q8NBP7 692 aaKnown RBP6.3□□□□□ -1.4
SDC2-206ENST00000521590 BANK1Q8NDB2 785 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 SHCBP1Q8NEM2 672 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 UPF3AQ9H1J1 476 aaKnown RBP6.3□□□□□ -1.4
SDC2-206ENST00000521590 CLDND1Q9NY35 253 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 SLC5A4Q9NY91 659 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 ITPR1Q14643 2758 aa6.3□□□□□ -1.4
SDC2-206ENST00000521590 SMG1Q96Q15 3661 aaKnown RBP6.3□□□□□ -1.4
SDC2-206ENST00000521590 LMNAP02545 664 aaKnown RBP6.29□□□□□ -1.4
SDC2-206ENST00000521590 C6orf222P0C671 652 aaPredicted RBP6.29□□□□□ -1.4
SDC2-206ENST00000521590 ARP10275 920 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 ACTN1P12814 892 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 TMPOP42166 694 aaKnown RBP6.29□□□□□ -1.4
SDC2-206ENST00000521590 GJA9P57773 515 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 SH3BP2P78314 561 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 SMAD4Q13485 552 aaKnown RBP6.29□□□□□ -1.4
SDC2-206ENST00000521590 CCDC57Q2TAC2 916 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 ZNF792Q3KQV3 632 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 USP17L2Q6R6M4 530 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 RPAINQ86UA6 219 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 LURAP1LQ8IV03 231 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 DCLK2Q8N568 766 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 EHBP1Q8NDI1 1231 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 IRF7Q92985 503 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 C17orf80Q9BSJ5 609 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 SPATC1LQ9H0A9 340 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 DNAJC18Q9H819 358 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 CTNNA3Q9UI47 895 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 CHMP3Q9Y3E7 222 aa6.29□□□□□ -1.4
SDC2-206ENST00000521590 DMXL2Q8TDJ6 3036 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 MICAL3Q7RTP6 2002 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 MAPK8IP3Q9UPT6 1336 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 CACNA1FO60840 1977 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 HELZ2Q9BYK8 2649 aaKnown RBP6.28□□□□□ -1.4
SDC2-206ENST00000521590 ELL2O00472 640 aaPredicted RBP6.28□□□□□ -1.4
SDC2-206ENST00000521590 TBX10O75333 385 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 EYA4O95677 639 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 SNAI1O95863 264 aaPredicted RBP6.28□□□□□ -1.4
SDC2-206ENST00000521590 LDHBP07195 334 aaKnown RBP6.28□□□□□ -1.4
SDC2-206ENST00000521590 FGFR2P21802 821 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 ICAM3P32942 547 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 NKX3-2P78367 333 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 ITGA7Q13683 1181 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 TIGD5Q53EQ6 642 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 GNASQ5JWF2 1037 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 NPAS3Q8IXF0 933 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 ZFP42Q96MM3 310 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 MROH8Q9H579 483 aa6.28□□□□□ -1.4
SDC2-206ENST00000521590 HERC5Q9UII4 1024 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms