RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 CCL23P55773 120 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 PSMC6P62333 389 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 TTBK2Q6IQ55 1244 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 OTOP2Q7RTS6 562 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 TMEM47Q9BQJ4 181 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
PRKDC-204ENST00000521331 SLC28A3Q9HAS3 691 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 PRDM6Q9NQX0 595 aa17.54■□□□□ 0.4
PRKDC-204ENST00000521331 ZMYM6O95789 1325 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 PTPDC1A2A3K4 754 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 NFIBO00712 420 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 FGAP02671 866 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 PFKMP08237 780 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 MCMDC2Q4G0Z9 681 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 RRP12Q5JTH9 1297 aaKnown RBP17.53■□□□□ 0.4
PRKDC-204ENST00000521331 TMEM63BQ5T3F8 832 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
PRKDC-204ENST00000521331 PURBQ96QR8 312 aaKnown RBP17.53■□□□□ 0.4
PRKDC-204ENST00000521331 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
PRKDC-204ENST00000521331 WNT8AQ9H1J5 351 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 NKX2-4Q9H2Z4 354 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 SLC4A7Q9Y6M7 1214 aa17.53■□□□□ 0.4
PRKDC-204ENST00000521331 LRRC37A2A6NM11 1700 aa17.52■□□□□ 0.4
PRKDC-204ENST00000521331 FRMPD2Q68DX3 1309 aaPredicted RBP17.52■□□□□ 0.4
PRKDC-204ENST00000521331 RBM47A0AV96 593 aaKnown RBP17.52■□□□□ 0.4
PRKDC-204ENST00000521331 PCP11498 1178 aaKnown RBP17.52■□□□□ 0.4
PRKDC-204ENST00000521331 PDE1AP54750 535 aa17.52■□□□□ 0.4
PRKDC-204ENST00000521331 BRDTQ58F21 947 aaPredicted RBP17.52■□□□□ 0.4
PRKDC-204ENST00000521331 PPM1EQ8WY54 764 aa17.52■□□□□ 0.4
PRKDC-204ENST00000521331 GPCPD1Q9NPB8 672 aa17.52■□□□□ 0.4
PRKDC-204ENST00000521331 GPHNQ9NQX3 736 aaPredicted RBP17.52■□□□□ 0.4
PRKDC-204ENST00000521331 RAD50Q92878 1312 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRKDC-204ENST00000521331 HSPD1P10809 573 aaKnown RBP17.51■□□□□ 0.39
PRKDC-204ENST00000521331 PDHBP11177 359 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 CALML3P27482 149 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 PURAQ00577 322 aaKnown RBP17.51■□□□□ 0.39
PRKDC-204ENST00000521331 RNF207Q6ZRF8 634 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 OR6J1Q8NGC5 347 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 TTC14Q96N46 770 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
PRKDC-204ENST00000521331 THEGQ9P2T0 379 aa17.51■□□□□ 0.39
PRKDC-204ENST00000521331 YBX2Q9Y2T7 364 aaKnown RBP17.51■□□□□ 0.39
PRKDC-204ENST00000521331 TNKSO95271 1327 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 WDR19Q8NEZ3 1342 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 A0A0D9SFI3 127 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 ZBBXA8MT70 800 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 B4DLN1 442 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 MYL3P08590 195 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 IGFBP4P22692 258 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
PRKDC-204ENST00000521331 PDE4DQ08499 809 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 ZNF543Q08ER8 600 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 ADGRE1Q14246 886 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 DNERQ8NFT8 737 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 SCLYQ96I15 445 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 FAM227BQ96M60 508 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
PRKDC-204ENST00000521331 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
PRKDC-204ENST00000521331 TNFRSF10AO00220 468 aa17.49■□□□□ 0.39
PRKDC-204ENST00000521331 KPNA6O60684 536 aa17.49■□□□□ 0.39
PRKDC-204ENST00000521331 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
PRKDC-204ENST00000521331 ATP2A2P16615 1042 aaKnown RBP17.49■□□□□ 0.39
PRKDC-204ENST00000521331 EDNRBP24530 442 aa17.49■□□□□ 0.39
PRKDC-204ENST00000521331 HDAC1Q13547 482 aaPredicted RBP17.49■□□□□ 0.39
PRKDC-204ENST00000521331 PPP2R2DQ66LE6 453 aa17.49■□□□□ 0.39
PRKDC-204ENST00000521331 MFSD6Q6ZSS7 791 aa17.49■□□□□ 0.39
PRKDC-204ENST00000521331 SCFD2Q8WU76 684 aa17.49■□□□□ 0.39
PRKDC-204ENST00000521331 CHD9Q3L8U1 2897 aa17.48■□□□□ 0.39
PRKDC-204ENST00000521331 CYP2C9P11712 490 aa17.48■□□□□ 0.39
PRKDC-204ENST00000521331 RFC2P35250 354 aa17.48■□□□□ 0.39
PRKDC-204ENST00000521331 NT5C2P49902 561 aa17.48■□□□□ 0.39
PRKDC-204ENST00000521331 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
PRKDC-204ENST00000521331 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
PRKDC-204ENST00000521331 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
PRKDC-204ENST00000521331 GPATCH4Q5T3I0 446 aaKnown RBP17.48■□□□□ 0.39
PRKDC-204ENST00000521331 NFRKBQ6P4R8 1299 aa17.48■□□□□ 0.39
PRKDC-204ENST00000521331 VWCEQ96DN2 955 aa17.48■□□□□ 0.39
PRKDC-204ENST00000521331 ASB2Q96Q27 587 aa17.48■□□□□ 0.39
PRKDC-204ENST00000521331 RNF41Q9H4P4 317 aaPredicted RBP17.48■□□□□ 0.39
PRKDC-204ENST00000521331 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 A6NJR5 290 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 ACTN1P12814 892 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 RABGGTBP53611 331 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 MFAP1P55081 439 aaKnown RBP17.47■□□□□ 0.39
PRKDC-204ENST00000521331 HAND2P61296 217 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 PTPN11Q06124 597 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-204ENST00000521331 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-204ENST00000521331 CCDC85BQ15834 202 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-204ENST00000521331 NBPF20Q3BBV1 942 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 FAM47CQ5HY64 1035 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-204ENST00000521331 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 ESR2Q92731 530 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 MAF1Q9H063 256 aa17.47■□□□□ 0.39
PRKDC-204ENST00000521331 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms