RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CSF2RAP15509 400 aa17.81■□□□□ 0.44
CSMD1-207ENST00000520451 CALML3P27482 149 aa17.81■□□□□ 0.44
CSMD1-207ENST00000520451 ITGA7Q13683 1181 aa17.81■□□□□ 0.44
CSMD1-207ENST00000520451 RNF207Q6ZRF8 634 aa17.81■□□□□ 0.44
CSMD1-207ENST00000520451 SLC43A3Q8NBI5 491 aa17.81■□□□□ 0.44
CSMD1-207ENST00000520451 WDR19Q8NEZ3 1342 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 TMEM265A0A087WTH1 108 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 LOC102724159A0A0B4J2E5 919 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.8■□□□□ 0.44
CSMD1-207ENST00000520451 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.8■□□□□ 0.44
CSMD1-207ENST00000520451 GOLGA8HP0CJ92 632 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 CYP2C18P33260 490 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 PWP2Q15269 919 aaKnown RBP17.8■□□□□ 0.44
CSMD1-207ENST00000520451 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 TMEM240Q5SV17 173 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 GPATCH4Q5T3I0 446 aaKnown RBP17.8■□□□□ 0.44
CSMD1-207ENST00000520451 C16orf59Q7L2K0 433 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 DGKHQ86XP1 1220 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 MYLIPQ8WY64 445 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 WDR11Q9BZH6 1224 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 CUL9Q8IWT3 2517 aa17.8■□□□□ 0.44
CSMD1-207ENST00000520451 GRIN2DO15399 1336 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 HIP1O00291 1037 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 KDM4AO75164 1064 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 ACRP10323 421 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 DNAJB2P25686 324 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 PSMC6P62333 389 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 IQCA1Q86XH1 822 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
CSMD1-207ENST00000520451 MAFAQ8NHW3 353 aaPredicted RBP17.79■□□□□ 0.44
CSMD1-207ENST00000520451 HIPK3Q9H422 1215 aa17.79■□□□□ 0.44
CSMD1-207ENST00000520451 NT5C2P49902 561 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 RPS6P62753 249 aaKnown RBP17.78■□□□□ 0.44
CSMD1-207ENST00000520451 PDE4DQ08499 809 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 USH1GQ495M9 461 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 CCDC178Q5BJE1 867 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 PSRC1Q6PGN9 363 aaPredicted RBP17.78■□□□□ 0.44
CSMD1-207ENST00000520451 PNMA1Q8ND90 353 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 MPHOSPH6Q99547 160 aaKnown RBP17.78■□□□□ 0.44
CSMD1-207ENST00000520451 SEZ6LQ9BYH1 1024 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 UBA5Q9GZZ9 404 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 TRPV6Q9H1D0 765 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 CPVLQ9H3G5 476 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
CSMD1-207ENST00000520451 LAMA4Q16363 1823 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 RBM47A0AV96 593 aaKnown RBP17.77■□□□□ 0.44
CSMD1-207ENST00000520451 B4E1Z4 1266 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 B4GALT4O60513 344 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 FOSL2P15408 326 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 ZNF365Q70YC5 407 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 OR6J1Q8NGC5 347 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 IL23AQ9NPF7 189 aa17.77■□□□□ 0.44
CSMD1-207ENST00000520451 PRUNE2Q8WUY3 3088 aa17.77■□□□□ 0.43
CSMD1-207ENST00000520451 UMODL1Q5DID0 1318 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 MYL3P08590 195 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 CPT1AP50416 773 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 CDC37Q16543 378 aaPredicted RBP17.76■□□□□ 0.43
CSMD1-207ENST00000520451 IMMTQ16891 758 aaKnown RBP17.76■□□□□ 0.43
CSMD1-207ENST00000520451 DNERQ8NFT8 737 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 TIFAQ96CG3 184 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 ZSCAN10Q96SZ4 725 aaPredicted RBP17.76■□□□□ 0.43
CSMD1-207ENST00000520451 POLR3EQ9NVU0 708 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 CTNNA3Q9UI47 895 aa17.76■□□□□ 0.43
CSMD1-207ENST00000520451 EDNRBP24530 442 aa17.75■□□□□ 0.43
CSMD1-207ENST00000520451 CCL23P55773 120 aa17.75■□□□□ 0.43
CSMD1-207ENST00000520451 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
CSMD1-207ENST00000520451 RASIP1Q5U651 963 aa17.75■□□□□ 0.43
CSMD1-207ENST00000520451 ENAHQ8N8S7 591 aaPredicted RBP17.75■□□□□ 0.43
CSMD1-207ENST00000520451 SCFD2Q8WU76 684 aa17.75■□□□□ 0.43
CSMD1-207ENST00000520451 ANKS1AQ92625 1134 aa17.75■□□□□ 0.43
CSMD1-207ENST00000520451 NOC4LQ9BVI4 516 aaKnown RBP17.75■□□□□ 0.43
CSMD1-207ENST00000520451 ALDH8A1Q9H2A2 487 aaPredicted RBP17.75■□□□□ 0.43
CSMD1-207ENST00000520451 ZSWIM5Q9P217 1185 aa17.75■□□□□ 0.43
CSMD1-207ENST00000520451 TNKSO95271 1327 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 RAD50Q92878 1312 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 GRXCR1A8MXD5 290 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 B4DLN1 442 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 NKRFO15226 690 aaKnown RBP eCLIP17.74■□□□□ 0.43
CSMD1-207ENST00000520451 MRPL12P52815 198 aaKnown RBP17.74■□□□□ 0.43
CSMD1-207ENST00000520451 PURAQ00577 322 aaKnown RBP17.74■□□□□ 0.43
CSMD1-207ENST00000520451 ASPRV1Q53RT3 343 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 BRDTQ58F21 947 aaPredicted RBP17.74■□□□□ 0.43
CSMD1-207ENST00000520451 ADGRF4Q8IZF3 695 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 RGS22Q8NE09 1264 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 HERVK_113Q902F9 699 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 MTG1Q9BT17 334 aaPredicted RBP17.74■□□□□ 0.43
CSMD1-207ENST00000520451 PBX4Q9BYU1 374 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 KRT23Q9C075 422 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
CSMD1-207ENST00000520451 ZNF576Q9H609 170 aa17.74■□□□□ 0.43
CSMD1-207ENST00000520451 GPHNQ9NQX3 736 aaPredicted RBP17.74■□□□□ 0.43
CSMD1-207ENST00000520451 ABCB11O95342 1321 aa17.73■□□□□ 0.43
CSMD1-207ENST00000520451 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
CSMD1-207ENST00000520451 FGBP02675 491 aa17.73■□□□□ 0.43
CSMD1-207ENST00000520451 PARP1P09874 1014 aaKnown RBP17.73■□□□□ 0.43
CSMD1-207ENST00000520451 PBX2P40425 430 aa17.73■□□□□ 0.43
CSMD1-207ENST00000520451 COPS5Q92905 334 aa17.73■□□□□ 0.43
CSMD1-207ENST00000520451 UBAC1Q9BSL1 405 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms