RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 WDR18Q9BV38 432 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 RUSC1Q9BVN2 902 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 COL25A1Q9BXS0 654 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 CYP4F12Q9HCS2 524 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 HOMER2Q9NSB8 354 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 INTS7Q9NVH2 962 aaKnown RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 LRP2BPQ9P2M1 347 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 CCNL1Q9UK58 526 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 LTBP1Q14766 1721 aa6.28□□□□□ -1.4
HMGB1P23-201ENST00000518743 SPATA31E1Q6ZUB1 1445 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 CLEC3AO75596 197 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PMLP29590 882 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 ECE1P42892 770 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 KRT76Q01546 638 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 SAFB2Q14151 953 aaKnown RBP eCLIP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 SETDB1Q15047 1291 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 ZYXQ15942 572 aaKnown RBP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PLEKHG6Q3KR16 790 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 TKFCQ3LXA3 575 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 WWC2Q6AWC2 1192 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 POMZP3Q6PJE2 187 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 CHSY3Q70JA7 882 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 SMIM5Q71RC9 77 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 KLHL6Q8WZ60 621 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 GPR101Q96P66 508 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 AARSD1Q9BTE6 412 aaKnown RBP6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 DHRS4Q9BTZ2 278 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 CARD10Q9BWT7 1032 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 MAPRE3Q9UPY8 281 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
HMGB1P23-201ENST00000518743 TIAM2Q8IVF5 1701 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MEGF11A6BM72 1044 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RASSF10A6NK89 507 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 SPDYE3A6NKU9 549 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CHURC1-FNTBB4DL54 471 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 PIK3R2O00459 728 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CA12O43570 354 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 ADCY3O60266 1144 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 ECEL1O95672 775 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 STAT3P40763 770 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RAC1P63000 192 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RNF4P78317 190 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MAP7Q14244 749 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RNFT1Q5M7Z0 435 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 FERMT3Q86UX7 667 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CYB5D2Q8WUJ1 264 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CAPNS2Q96L46 248 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 SNX27Q96L92 541 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 SLC6A18Q96N87 628 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 KLHL42Q9P2K6 505 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MAGEC2Q9UBF1 373 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 STK17AQ9UEE5 414 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 KIF1BO60333 1816 aa6.26□□□□□ -1.41
HMGB1P23-201ENST00000518743 MEGF6O75095 1541 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 TRBV23-1A0A0A0MS06 115 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 NOP56O00567 594 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PPM1BO75688 479 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 MYCLP1P12525 358 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 DPEP1P16444 411 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 TGFB2P61812 414 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 EXOSC10Q01780 885 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PABPC4Q13310 644 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 DUOXA2Q1HG44 320 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 ANKRD39Q53RE8 183 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PPM1JQ5JR12 505 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 AHI1Q8N157 1196 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 MFSD2AQ8NA29 543 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 RNF208Q9H0X6 261 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 SUGCTQ9HAC7 445 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 NCOA5Q9HCD5 579 aaKnown RBP6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 TJP2Q9UDY2 1190 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PCDHB10Q9UN67 800 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 ATP8A1Q9Y2Q0 1164 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 PASKQ96RG2 1323 aa6.25□□□□□ -1.41
HMGB1P23-201ENST00000518743 CCDC88AQ3V6T2 1871 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 DNAJA2O60884 412 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 EFCAB14O75071 495 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 FGFR1P11362 822 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 AMPD1P23109 780 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 PLA2G5P39877 138 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 RASSF7Q02833 373 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 CYP4F22Q6NT55 531 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 CCDC144CPQ8IYA2 1237 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 PPM1KQ8N3J5 372 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 GALNT6Q8NCL4 622 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 WDR89Q96FK6 387 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 HAUS7Q99871 368 aa6.24□□□□□ -1.41
HMGB1P23-201ENST00000518743 WHRNQ9P202 907 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms