RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 CCDC174Q6PII3 467 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 GPRC5AQ8NFJ5 357 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 PIBF1Q8WXW3 757 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 COA7Q96BR5 231 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 RIC8AQ9NPQ8 531 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 FBXO40Q9UH90 709 aa13.15□□□□□ -0.3
ARFGEF1-202ENST00000517955 SMCO2A6NFE2 343 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 M0R2N6 131 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 OPLAHO14841 1288 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 DTNBO60941 627 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 NAPAP54920 295 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 CCNA1P78396 465 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 NUCB2P80303 420 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 HTRA3P83110 453 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 Q3C1V9 767 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 SNRNP48Q6IEG0 339 aaKnown RBP13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 MCF2L2Q86YR7 1114 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 CPXCR1Q8N123 301 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 MOV10L1Q9BXT6 1211 aaKnown RBP13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 FOXP1Q9H334 677 aaPredicted RBP13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 MROH8Q9H579 483 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 MTMR6Q9Y217 621 aa13.14□□□□□ -0.31
ARFGEF1-202ENST00000517955 H3BQV1 296 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 BRD1O95696 1058 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 HSD17B4P51659 736 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 NLRP5P59047 1200 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 CRHR2Q13324 411 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 USH1GQ495M9 461 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 DNAJC5GQ8N7S2 189 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 CUL5Q93034 780 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 SAGE1Q9NXZ1 904 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 RIPK3Q9Y572 518 aa13.13□□□□□ -0.31
ARFGEF1-202ENST00000517955 MEIS2O14770 477 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 ALAS1P13196 640 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 ADCY7P51828 1080 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 GRM1Q13255 1194 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 BLIDQ8IZY5 108 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 ABRAQ8N0Z2 381 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 ANKRD13CQ8N6S4 541 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 TNFRSF25Q93038 417 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 PAGR1Q9BTK6 254 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 KCNJ14Q9UNX9 436 aa13.12□□□□□ -0.31
ARFGEF1-202ENST00000517955 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 STRNO43815 780 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 FOSP01100 380 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 POLR2MP0CAP2 368 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 ERCC3P19447 782 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 MAPK4P31152 587 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 KRT2P35908 639 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 MAP2K1Q02750 393 aaPredicted RBP13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 PLS1Q14651 629 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 CHMP5Q9NZZ3 219 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 PFASO15067 1338 aa13.11□□□□□ -0.31
ARFGEF1-202ENST00000517955 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 BTBD18B2RXH4 712 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 STK25O00506 426 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 NFIBO00712 420 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 MUM1L1Q5H9M0 696 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 BRAPQ7Z569 592 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 PCDHA6Q9UN73 950 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 ZDHHC9Q9Y397 364 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 PCDHA8Q9Y5H6 950 aa13.1□□□□□ -0.31
ARFGEF1-202ENST00000517955 LOC102724159A0A0B4J2E5 919 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 PEX10O60683 326 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 RPS6P62753 249 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 GUCY1B3Q02153 619 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 RESTQ13127 1097 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 PKP1Q13835 747 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 PWP2Q15269 919 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 RNF207Q6ZRF8 634 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms