RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 FAM227BQ96M60 508 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 TMEM47Q9BQJ4 181 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 NOC4LQ9BVI4 516 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 AP5M1Q9H0R1 490 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 VTA1Q9NP79 307 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 HELLSQ9NRZ9 838 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 CCPG1Q9ULG6 757 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 BDP1A6H8Y1 2624 aa9.87□□□□□ -0.83
CTNNA1-203ENST00000517534 NCOR1O75376 2440 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 RBM47A0AV96 593 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 NFIBO00712 420 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 FGBP02675 491 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 HSPD1P10809 573 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 TOP1P11387 765 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 PDE1AP54750 535 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 CCL23P55773 120 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 DUSP28Q4G0W2 176 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 SYDE2Q5VT97 1194 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 KIAA1211Q6ZU35 1233 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 CLEC4DQ8WXI8 215 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 SEZ6LQ9BYH1 1024 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 WNT8AQ9H1J5 351 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 HIPK3Q9H422 1215 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 PRDM6Q9NQX0 595 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 TCP11L1Q9NUJ3 509 aa9.86□□□□□ -0.83
CTNNA1-203ENST00000517534 FRMPD2Q68DX3 1309 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 XIRP2A4UGR9 3374 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 LOC102724159A0A0B4J2E5 919 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 A0A0D9SFI3 127 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 ZEB2O60315 1214 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 SNHG28P0DPA3 235 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 PDHBP11177 359 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 ALDH5A1P51649 535 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 PWP2Q15269 919 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 MCMDC2Q4G0Z9 681 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 OTOP2Q7RTS6 562 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 ZNF589Q86UQ0 364 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 TICAM2Q86XR7 235 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 WDR11Q9BZH6 1224 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 ALDH8A1Q9H2A2 487 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 PRDM12Q9H4Q4 367 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 ADD3Q9UEY8 706 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 YBX2Q9Y2T7 364 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-203ENST00000517534 MCM3APO60318 1980 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 EDNRBP24530 442 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 RRP1P56182 461 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 HDAC1Q13547 482 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 TJAP1Q5JTD0 557 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 RRP12Q5JTH9 1297 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 AKNAD1Q5T1N1 836 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 SLC30A10Q6XR72 485 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 SYMPKQ92797 1274 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 SCLYQ96I15 445 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 CRBNQ96SW2 442 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 NKX2-4Q9H2Z4 354 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 TRMT13Q9NUP7 481 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 MSRAQ9UJ68 235 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 MYO9BQ13459 2157 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 MYH4Q9Y623 1939 aa9.84□□□□□ -0.83
CTNNA1-203ENST00000517534 ZMYM6O95789 1325 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 WDR19Q8NEZ3 1342 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 CYP2C9P11712 490 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 RABGGTBP53611 331 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 HAND2P61296 217 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 RPS6P62753 249 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 PURAQ00577 322 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 ZNF543Q08ER8 600 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 NMIQ13287 307 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 RAB30Q15771 203 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 TBC1D10CQ8IV04 446 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 RPUSD2Q8IZ73 545 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 TTC14Q96N46 770 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 GAS2L1Q99501 681 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 TOMM22Q9NS69 142 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
CTNNA1-203ENST00000517534 TNKSO95271 1327 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 TRANK1O15050 2925 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 PTPDC1A2A3K4 754 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 A6NJR5 290 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 MYL3P08590 195 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 MYOGP15173 224 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 CALML3P27482 149 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 NUBP1P53384 320 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 TTLL4Q14679 1199 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 NBPF20Q3BBV1 942 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 RNF207Q6ZRF8 634 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 RGS22Q8NE09 1264 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 OR6J1Q8NGC5 347 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 PPP1R13LQ8WUF5 828 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 ATXN2LQ8WWM7 1075 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 PPM1EQ8WY54 764 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 COPS5Q92905 334 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 MTG1Q9BT17 334 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 MTIF3Q9H2K0 278 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 SLC4A7Q9Y6M7 1214 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
CTNNA1-203ENST00000517534 NKRFO15226 690 aaKnown RBP eCLIP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms