RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 BAG3O95817 575 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 PRLRP16471 622 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 TRIM21P19474 475 aaKnown RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 IRX5P78411 483 aaPredicted RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 AMPD3Q01432 767 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 QSER1Q2KHR3 1735 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 ARHGAP27Q6ZUM4 889 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 C16orf86Q6ZW13 317 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 USP17L1Q7RTZ2 530 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 NEK8Q86SG6 692 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 KIAA0895Q8NCT3 520 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 RASSF8Q8NHQ8 419 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 MMTAG2Q9BU76 263 aaKnown RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 RTFDC1Q9BY42 306 aaPredicted RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 LACRTQ9GZZ8 138 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 ZNF287Q9HBT7 754 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 ZNHIT6Q9NWK9 470 aaKnown RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 VPS18Q9P253 973 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 STK17AQ9UEE5 414 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 PLAGL2Q9UPG8 496 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 SIK3Q9Y2K2 1263 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 LEMD3Q9Y2U8 911 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 LTBP1Q14766 1721 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 PVALEFA0A1B0GWK0 134 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 NUTM2BA6NNL0 878 aaPredicted RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 NUTM2EB1AL46 878 aaPredicted RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 KLRF2D3W0D1 207 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 KCNQ2O43526 872 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 N4BP1O75113 896 aaKnown RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 RPS6KA4O75676 772 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 PRPF6O94906 941 aaKnown RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 GNA11P29992 359 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 FXR2P51116 673 aaKnown RBP eCLIP7.44□□□□□ -1.22
CDH12-203ENST00000517378 PDE4DQ08499 809 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 TBC1D8BQ0IIM8 1120 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 STK4Q13043 487 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 KIAA1328Q86T90 577 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 NEDD1Q8NHV4 660 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 MTMR9Q96QG7 549 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 SETDB2Q96T68 719 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 MKNK2Q9HBH9 465 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 C6orf50Q9HD87 102 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 CWC15Q9P013 229 aaKnown RBP7.44□□□□□ -1.22
CDH12-203ENST00000517378 HDAC6Q9UBN7 1215 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 FAN1Q9Y2M0 1017 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 LRRC37AA6NMS7 1700 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 KIF13BQ9NQT8 1826 aa7.44□□□□□ -1.22
CDH12-203ENST00000517378 GREB1LQ9C091 1923 aaPredicted RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 KDM4FA0A1W2PPD8 638 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 ENC1O14682 589 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 ZNF263O14978 683 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 IPO7O95373 1038 aaKnown RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 IVLP07476 585 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 LMAN1P49257 510 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 GYS2P54840 703 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 NAPAP54920 295 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 EHHADHQ08426 723 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 IQCEQ6IPM2 695 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 NBPF5PQ86XG9 351 aaPredicted RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 TRIM58Q8NG06 486 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 HPCAL4Q9UM19 191 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 CCNT1O60563 726 aaKnown RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 SYF2O95926 243 aaKnown RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 CAPN2P17655 700 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 KLK7P49862 253 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 ASIC1P78348 528 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 HSP90B2PQ58FF3 399 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 FKBP15Q5T1M5 1219 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 UNC13DQ70J99 1090 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 ZNF444Q8N0Y2 327 aaPredicted RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 MMGT1Q8N4V1 131 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 COG1Q8WTW3 980 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 RRP36Q96EU6 259 aaKnown RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 NOC4LQ9BVI4 516 aaKnown RBP7.43□□□□□ -1.22
CDH12-203ENST00000517378 SH2D4AQ9H788 454 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 SNX12Q9UMY4 172 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 JRKLQ9Y4A0 524 aa7.43□□□□□ -1.22
CDH12-203ENST00000517378 LDHCP07864 332 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 FCER1AP12319 257 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 MTIF2P46199 727 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 LRRC63Q05C16 580 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 GRB10Q13322 594 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 GRAPQ13588 217 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 VWA3BQ502W6 1294 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 GUF1Q8N442 669 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 SLC44A5Q8NCS7 719 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 GRAPLQ8TC17 118 aaPredicted RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 SECISBP2LQ93073 1101 aaKnown RBP7.42□□□□□ -1.22
CDH12-203ENST00000517378 EDEM3Q9BZQ6 932 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 RIOX1Q9H6W3 641 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 BLOC1S4Q9NUP1 217 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 TFR2Q9UP52 801 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 THSD7AQ9UPZ6 1657 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 GPR75-ASB3A0A0A6YYF3 556 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 A0A0G2JS52 829 aa7.42□□□□□ -1.22
CDH12-203ENST00000517378 SMCO2A6NFE2 343 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms